Assembly Analysis List
GET /metagenomics/api/v1/assemblies/ERR034496/analyses?format=api
{ "links": { "first": "https://www.ebi.ac.uk/metagenomics/api/v1/assemblies/ERR034496/analyses?format=api&page=1", "last": "https://www.ebi.ac.uk/metagenomics/api/v1/assemblies/ERR034496/analyses?format=api&page=1", "next": null, "prev": null }, "data": [ { "type": "analysis-jobs", "id": "MGYA00002318", "attributes": { "accession": "MGYA00002318", "experiment-type": "assembly", "pipeline-version": "1.0", "analysis-summary": [ { "key": "Submitted nucleotide sequences", "value": "17143" }, { "key": "Nucleotide sequences after format-specific filtering", "value": "17143" }, { "key": "Nucleotide sequences after length filtering", "value": "1353" }, { "key": "Nucleotide sequences after undetermined bases filtering", "value": "1353" }, { "key": "Predicted CDS", "value": "1203" }, { "key": "Predicted CDS with InterProScan match", "value": "110" }, { "key": "Total InterProScan matches", "value": "169" }, { "key": "Nucleotide sequences after clustering", "value": "1353" }, { "key": "Nucleotide sequences after repeat masking and filtering", "value": "1303" }, { "key": "Contigs with InterProScan match", "value": "109" }, { "key": "Contigs with predicted CDS", "value": "1179" }, { "key": "Contigs with predicted RNA", "value": "29" } ], "analysis-status": "completed", "is-private": false, "last-update": "2024-01-29T15:29:19.757516", "mgx-accession": null, "complete-time": "2014-04-24T00:00:00", "instrument-platform": "", "instrument-model": "" }, "relationships": { "antismash-gene-clusters": { "links": { "related": "https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00002318/antismash-gene-clusters?format=api" } }, "assembly": { "data": { "type": "assemblies", "id": "ERR034496" }, "links": { "related": "https://www.ebi.ac.uk/metagenomics/api/v1/assemblies/ERR034496?format=api" } }, "taxonomy-ssu": { "links": { "related": "https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00002318/taxonomy/ssu?format=api" } }, "taxonomy": { "links": { "related": "https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00002318/taxonomy?format=api" } }, "go-slim": { "links": { "related": "https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00002318/go-slim?format=api" } }, "sample": { "data": { "type": "samples", "id": "ERS033181" }, "links": { "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS033181?format=api" } }, "genome-properties": { "links": { "related": "https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00002318/genome-properties?format=api" } }, "taxonomy-itsunite": { "links": { "related": "https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00002318/taxonomy/unite?format=api" } }, "study": { "data": { "type": "studies", "id": "MGYS00000358" }, "links": { "related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000358?format=api" } }, "taxonomy-lsu": { "links": { "related": "https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00002318/taxonomy/lsu?format=api" } }, "taxonomy-itsonedb": { "links": { "related": "https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00002318/taxonomy/itsonedb?format=api" } }, "go-terms": { "links": { "related": "https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00002318/go-terms?format=api" } }, "run": { "data": null }, "interpro-identifiers": { "links": { "related": "https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00002318/interpro-identifiers?format=api" } }, "downloads": { "links": { "related": "https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00002318/downloads?format=api" } } }, "links": { "self": "https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00002318?format=api" } } ], "meta": { "pagination": { "page": 1, "pages": 1, "count": 1 } } }