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InterPro-Version: 108.0
InterPro-Version-Minor: 0
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{
"metadata": {
"accession": "H3ZM41",
"id": "H3ZM41_THELN",
"source_organism": {
"taxId": "523849",
"scientificName": "Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 / NS-C)",
"fullName": "Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 / NS-C)"
},
"name": "tRNA-splicing endonuclease",
"description": [
"Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp"
],
"length": 170,
"sequence": "MSEFKFYLSGDRVFSTMESAINKLYNKRHYGEVVNGKLFLSLIEAAYLLDKGWIKVFDGEKELRVQELFEIGRKKDEQFDLKFLVYRDLRNRGYTVKTALKYGSHFRVYRKGMEEHADWLIWVVSENQKMYPNDLTARVRVAHGVRKKMVLAVVDEDNDVVYYHIGRIKF",
"proteome": "UP000015502",
"gene": "endA",
"go_terms": [
{
"identifier": "GO:0000213",
"name": "tRNA-intron lyase activity",
"category": {
"code": "F",
"name": "molecular_function"
}
},
{
"identifier": "GO:0006388",
"name": "tRNA splicing, via endonucleolytic cleavage and ligation",
"category": {
"code": "P",
"name": "biological_process"
}
},
{
"identifier": "GO:0003676",
"name": "nucleic acid binding",
"category": {
"code": "F",
"name": "molecular_function"
}
}
],
"protein_evidence": 3,
"source_database": "unreviewed",
"is_fragment": false,
"in_alphafold": true,
"in_bfvd": false,
"ida_accession": "941abee8bd23336a20187cbb8cd57119e9ef0738",
"counters": {
"domain_architectures": 2064,
"entries": 18,
"isoforms": 0,
"proteomes": 1,
"sets": 3,
"structures": 0,
"taxa": 1,
"dbEntries": {
"ssf": 2,
"pfam": 2,
"cathgene3d": 2,
"cdd": 1,
"hamap": 1,
"pirsf": 1,
"ncbifam": 1,
"panther": 1,
"interpro": 7
},
"proteome": 1,
"taxonomy": 1,
"similar_proteins": 2064
}
}
}