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{
"metadata": {
"accession": "A0A8C3F6D3",
"id": "A0A8C3F6D3_CHRPI",
"source_organism": {
"taxId": "8478",
"scientificName": "Chrysemys picta bellii",
"fullName": "Chrysemys picta bellii (Western painted turtle)"
},
"name": "Pseudouridylate synthase TRUB1",
"description": [
"Pseudouridine synthase that catalyzes pseudouridylation of mRNAs and tRNAs. Mediates pseudouridylation of mRNAs with the consensus sequence 5'-GUUCNANNC-3', harboring a stem-loop structure. Constitutes the major pseudouridine synthase acting on mRNAs. Also catalyzes pseudouridylation of some tRNAs, including synthesis of pseudouridine(55) from uracil-55, in the psi GC loop of a subset of tRNAs. Promotes the processing of pri-let-7 microRNAs (pri-miRNAs) independently of its RNA pseudouridylate synthase activity. Acts by binding to the stem-loop structure on pri-let-7, preventing LIN28-binding (LIN28A and/or LIN28B), thereby enhancing the interaction between pri-let-7 and the microprocessor DGCR8, which mediates miRNA maturation"
],
"length": 289,
"sequence": "MAEEVHGKLGHVMANPAAKLLSLSGLFAVYKPKGPTSANVLNQLKEKLLAEAGIQKCVRKRKKQILKIGHGGTLDSAAAGVLVVGIGKGTKMLGNILAGSKKYLAIGELGKATDTLDATGKVTEEKPYDQITKEDLERVLQKFTGDIMQVPPLYSALKRDGQRLSSLMKKGEAVEAKPARPVTVYSLSLQNFQSPLFTLDVECGGGFYVRSLVSDIGKELSSCANVQELTRTKQGPFTLEEHALHEDKWTIDEIAQSLEHCMSFLAVEPSLKKLKTEHSEESTVNCEDK",
"proteome": "UP000694380",
"gene": "TRUB1",
"go_terms": [
{
"identifier": "GO:0003723",
"name": "RNA binding",
"category": {
"code": "F",
"name": "molecular_function"
}
},
{
"identifier": "GO:0009982",
"name": "pseudouridine synthase activity",
"category": {
"code": "F",
"name": "molecular_function"
}
},
{
"identifier": "GO:0001522",
"name": "pseudouridine synthesis",
"category": {
"code": "P",
"name": "biological_process"
}
},
{
"identifier": "GO:0009451",
"name": "RNA modification",
"category": {
"code": "P",
"name": "biological_process"
}
},
{
"identifier": "GO:0006396",
"name": "RNA processing",
"category": {
"code": "P",
"name": "biological_process"
}
}
],
"protein_evidence": 3,
"source_database": "unreviewed",
"is_fragment": false,
"in_alphafold": true,
"in_bfvd": false,
"ida_accession": "28a6c0c889cc202e14ae965a0574b1a1c3b7da3c",
"counters": {
"domain_architectures": 6466,
"entries": 9,
"isoforms": 0,
"proteomes": 1,
"sets": 1,
"structures": 0,
"taxa": 1,
"dbEntries": {
"cathgene3d": 1,
"ssf": 1,
"pfam": 1,
"panther": 1,
"hamap": 1,
"ncbifam": 1,
"interpro": 3
},
"proteome": 1,
"taxonomy": 1,
"similar_proteins": 6466
}
}
}