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{
"metadata": {
"accession": "PF22758",
"entry_id": null,
"type": "family",
"go_terms": null,
"source_database": "pfam",
"member_databases": null,
"integrated": "IPR054438",
"hierarchy": null,
"name": {
"name": "Structural cement protein (E217 gp24/Pam3 gp6)",
"short": "Phage_cement"
},
"description": [
{
"text": "<p>E217 is a Pseudomonas phage used in an experimental cocktail to eradicate cystic fibrosis-associated Pseudomonas aeruginosa. Gp24 is a trimeric structural protein and component of the E217 icosahedral head.Gp24 adopts a beta-tulip fold similar to the gp87 protein found in the thermophilic phage P74-26. Each gp24 subunit consists of two anti-parallel beta-sheets, that form a tulip-like structure. Gp24 structural protein probably stabilises the E217 capsid. This entry includes the cement protein gp6 of cyanophage Pam3. It consists of an N-terminal beta-tulip domain followed by a C-terminal domain of seven antiparallel beta-strands. Gp6 trimers sit at the icosahedral threefold and quasi-threefold axes, stabilizing the capsid shell.</p>",
"llm": false,
"checked": false,
"updated": false
}
],
"wikipedia": null,
"literature": {
"PUB00154413": {
"PMID": 36656854,
"ISBN": null,
"volume": "120",
"issue": "4",
"year": 2023,
"title": "Fine structure and assembly pattern of a minimal myophage Pam3.",
"URL": null,
"raw_pages": "e2213727120",
"medline_journal": "Proc Natl Acad Sci U S A",
"ISO_journal": "Proc Natl Acad Sci U S A",
"authors": [
"Yang F",
"Jiang YL",
"Zhang JT",
"Zhu J",
"Du K",
"Yu RC",
"Wei ZL",
"Kong WW",
"Cui N",
"Li WF",
"Chen Y",
"Li Q",
"Zhou CZ."
],
"DOI_URL": "https://doi.org/10.1073/pnas.2213727120"
},
"PUB00153918": {
"PMID": 37422479,
"ISBN": null,
"volume": "14",
"issue": "1",
"year": 2023,
"title": "High-resolution cryo-EM structure of the Pseudomonas bacteriophage E217.",
"URL": null,
"raw_pages": "4052",
"medline_journal": "Nat Commun",
"ISO_journal": "Nat Commun",
"authors": [
"Li F",
"Hou CD",
"Lokareddy RK",
"Yang R",
"Forti F",
"Briani F",
"Cingolani G."
],
"DOI_URL": "https://doi.org/10.1038/s41467-023-39756-z"
}
},
"set_info": {
"accession": "CL0845",
"name": "Beta_tulip"
},
"overlaps_with": null,
"counters": {
"subfamilies": 0,
"domain_architectures": 7,
"interactions": 0,
"matches": 1250,
"pathways": 0,
"proteins": 1246,
"proteomes": 639,
"sets": 1,
"structural_models": {
"alphafold": 598,
"bfvd": 15
},
"structures": 6,
"taxa": 2060
},
"entry_annotations": {
"hmm": 0,
"logo": 0,
"alignment:seed": 161,
"alignment:full": 368
},
"cross_references": {},
"is_llm": false,
"is_reviewed_llm": false,
"is_updated_llm": false,
"representative_structure": null
}
}