HTTP 200 OK
Allow: GET, HEAD
Content-Type: application/json
InterPro-Version: 108.0
InterPro-Version-Minor: 0
Vary: Accept
{
"metadata": {
"accession": "cd22332",
"entry_id": null,
"type": "domain",
"go_terms": null,
"source_database": "cdd",
"member_databases": null,
"integrated": null,
"hierarchy": null,
"name": {
"name": "N-terminal domain of HsdR motor subunit of type I restriction-modification enzyme EcoR124I and similar systems",
"short": "HsdR_N"
},
"description": [
{
"text": "<p>The N-terminal endonuclease-like domain of HsdR motor subunit of type I restriction-modification enzyme EcoR124I belongs to a wider superfamily of PDDEXK nucleases including very short patch repair (Vsr) endonucleases, archaeal Holliday junction resolvases, MutH methyl-directed DNA mismatch-repair endonucleases, and catalytic domains of many restriction endonucleases, such as EcoRI, BamHI, and FokI. [[cite:PUB00049980], [cite:PUB00147257], [cite:PUB00110635], [cite:PUB00110634]]</p>",
"llm": false,
"checked": false,
"updated": false
}
],
"wikipedia": null,
"literature": {
"PUB00049980": {
"PMID": 19079266,
"ISBN": null,
"volume": "16",
"issue": "1",
"year": 2009,
"title": "Structure of the motor subunit of type I restriction-modification complex EcoR124I.",
"URL": null,
"raw_pages": "94-5",
"medline_journal": "Nat Struct Mol Biol",
"ISO_journal": "Nat. Struct. Mol. Biol.",
"authors": [
"Lapkouski M",
"Panjikar S",
"Janscak P",
"Smatanova IK",
"Carey J",
"Ettrich R",
"Csefalvay E."
],
"DOI_URL": "http://dx.doi.org/10.1038/nsmb.1523"
},
"PUB00147257": {
"PMID": 18952104,
"ISBN": null,
"volume": "384",
"issue": "5",
"year": 2008,
"title": "The interrelationship of helicase and nuclease domains during DNA translocation by the molecular motor EcoR124I.",
"URL": null,
"raw_pages": "1273-86",
"medline_journal": "J Mol Biol",
"ISO_journal": "J Mol Biol",
"authors": [
"Sisakova E",
"Weiserova M",
"Dekker C",
"Seidel R",
"Szczelkun MD."
],
"DOI_URL": null
},
"PUB00110635": {
"PMID": 14529527,
"ISBN": null,
"volume": "4",
"issue": "5",
"year": 2003,
"title": "Crystallographic and bioinformatic studies on restriction endonucleases: inference of evolutionary relationships in the \"midnight zone\" of homology.",
"URL": null,
"raw_pages": "327-37",
"medline_journal": "Curr Protein Pept Sci",
"ISO_journal": "Curr Protein Pept Sci",
"authors": [
"Bujnicki JM."
],
"DOI_URL": null
},
"PUB00110634": {
"PMID": 10654258,
"ISBN": null,
"volume": "50",
"issue": "1",
"year": 2000,
"title": "Phylogeny of the restriction endonuclease-like superfamily inferred from comparison of protein structures.",
"URL": null,
"raw_pages": "39-44",
"medline_journal": "J Mol Evol",
"ISO_journal": "J Mol Evol",
"authors": [
"Bujnicki JM."
],
"DOI_URL": null
}
},
"set_info": {
"accession": "cl40440",
"name": "PDDEXK_nuclease-like"
},
"overlaps_with": null,
"counters": {
"subfamilies": 0,
"domain_architectures": 0,
"interactions": 0,
"matches": 15430,
"pathways": 0,
"proteins": 15430,
"proteomes": 7026,
"sets": 1,
"structural_models": {
"alphafold": 12272,
"bfvd": 0
},
"structures": 11,
"taxa": 14167
},
"entry_annotations": {},
"cross_references": {},
"is_llm": false,
"is_reviewed_llm": false,
"is_updated_llm": false,
"representative_structure": null
}
}