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{
    "metadata": {
        "accession": "cd22332",
        "entry_id": null,
        "type": "domain",
        "go_terms": null,
        "source_database": "cdd",
        "member_databases": null,
        "integrated": null,
        "hierarchy": null,
        "name": {
            "name": "N-terminal domain of HsdR motor subunit of type I restriction-modification enzyme EcoR124I and similar systems",
            "short": "HsdR_N"
        },
        "description": [
            {
                "text": "<p>The N-terminal endonuclease-like domain of HsdR motor subunit of type I restriction-modification enzyme EcoR124I belongs to a wider superfamily of PDDEXK nucleases including very short patch repair (Vsr) endonucleases, archaeal Holliday junction resolvases, MutH methyl-directed DNA mismatch-repair endonucleases, and catalytic domains of many restriction endonucleases, such as EcoRI, BamHI, and FokI. [[cite:PUB00049980], [cite:PUB00147257], [cite:PUB00110635], [cite:PUB00110634]]</p>",
                "llm": false,
                "checked": false,
                "updated": false
            }
        ],
        "wikipedia": null,
        "literature": {
            "PUB00049980": {
                "PMID": 19079266,
                "ISBN": null,
                "volume": "16",
                "issue": "1",
                "year": 2009,
                "title": "Structure of the motor subunit of type I restriction-modification complex EcoR124I.",
                "URL": null,
                "raw_pages": "94-5",
                "medline_journal": "Nat Struct Mol Biol",
                "ISO_journal": "Nat. Struct. Mol. Biol.",
                "authors": [
                    "Lapkouski M",
                    "Panjikar S",
                    "Janscak P",
                    "Smatanova IK",
                    "Carey J",
                    "Ettrich R",
                    "Csefalvay E."
                ],
                "DOI_URL": "http://dx.doi.org/10.1038/nsmb.1523"
            },
            "PUB00147257": {
                "PMID": 18952104,
                "ISBN": null,
                "volume": "384",
                "issue": "5",
                "year": 2008,
                "title": "The interrelationship of helicase and nuclease domains during DNA translocation by the molecular motor EcoR124I.",
                "URL": null,
                "raw_pages": "1273-86",
                "medline_journal": "J Mol Biol",
                "ISO_journal": "J Mol Biol",
                "authors": [
                    "Sisakova E",
                    "Weiserova M",
                    "Dekker C",
                    "Seidel R",
                    "Szczelkun MD."
                ],
                "DOI_URL": null
            },
            "PUB00110635": {
                "PMID": 14529527,
                "ISBN": null,
                "volume": "4",
                "issue": "5",
                "year": 2003,
                "title": "Crystallographic and bioinformatic studies on restriction endonucleases: inference of evolutionary relationships in the \"midnight zone\" of homology.",
                "URL": null,
                "raw_pages": "327-37",
                "medline_journal": "Curr Protein Pept Sci",
                "ISO_journal": "Curr Protein Pept Sci",
                "authors": [
                    "Bujnicki JM."
                ],
                "DOI_URL": null
            },
            "PUB00110634": {
                "PMID": 10654258,
                "ISBN": null,
                "volume": "50",
                "issue": "1",
                "year": 2000,
                "title": "Phylogeny of the restriction endonuclease-like superfamily inferred from comparison of protein structures.",
                "URL": null,
                "raw_pages": "39-44",
                "medline_journal": "J Mol Evol",
                "ISO_journal": "J Mol Evol",
                "authors": [
                    "Bujnicki JM."
                ],
                "DOI_URL": null
            }
        },
        "set_info": {
            "accession": "cl40440",
            "name": "PDDEXK_nuclease-like"
        },
        "overlaps_with": null,
        "counters": {
            "subfamilies": 0,
            "domain_architectures": 0,
            "interactions": 0,
            "matches": 15430,
            "pathways": 0,
            "proteins": 15430,
            "proteomes": 7026,
            "sets": 1,
            "structural_models": {
                "alphafold": 12272,
                "bfvd": 0
            },
            "structures": 11,
            "taxa": 14167
        },
        "entry_annotations": {},
        "cross_references": {},
        "is_llm": false,
        "is_reviewed_llm": false,
        "is_updated_llm": false,
        "representative_structure": null
    }
}