IHECRE00000221.4 LIVE IHEC harmonized v2.0 JSON  

Species Homo sapiens
Type Single donor
Status Complete
Project CEEHRC
Description Primary Tissue from Diseased Brain from donor ID: SM2582 (age Unknown, Female, Diseased Brain sample with donor health condition: Brain Glioblastoma Multiforme) from Cairncross Lab
Previous versions IHECRE00000221.3   IHECRE00000221.2   IHECRE00000221.1  

Metadata


Biomaterial type primary tissue
Tissue type brain
Biospecimen
    Broad label brain
    Intermediate label brain
    Curated label Glioblastoma
    Ontology curie UBERON:0000955
Biospecimen disease
    Broad label Cancer
    Intermediate label Glioma
    Curated label Glioblastoma
    Ontology curie NCIM:C0017636
Donor
    Type Single donor
    ID SM2582
    Age unknown
    Age unit unknown
    Life stage adult
    Sex female
    Health status Glioblastoma
    Health status ontology curie NCIM:C0017636

Experimental data


Assay Type Experiment Type Archive Primary ID Secondary ID URL
WGS WGS EGA EGAX00001248532 EGAD00001003963 https://ega-archive.org/datasets/EGAD00001003963
ChIP-Seq Histone H3K4me1 EGA EGAX00001258395 EGAD00001003963 https://ega-archive.org/datasets/EGAD00001003963
ChIP-Seq Histone H3K4me1 EGA EGAX00001258403 EGAD00001003963 https://ega-archive.org/datasets/EGAD00001003963
ChIP-Seq Histone H3K4me3 EGA EGAX00001258394 EGAD00001003963 https://ega-archive.org/datasets/EGAD00001003963
ChIP-Seq Histone H3K4me3 EGA EGAX00001258402 EGAD00001003963 https://ega-archive.org/datasets/EGAD00001003963
ChIP-Seq Histone H3K9me3 EGA EGAX00001255608 EGAD00001003963 https://ega-archive.org/datasets/EGAD00001003963
ChIP-Seq Histone H3K27me3 EGA EGAX00001255612 EGAD00001003963 https://ega-archive.org/datasets/EGAD00001003963
ChIP-Seq Histone H3K36me3 EGA EGAX00001255611 EGAD00001003963 https://ega-archive.org/datasets/EGAD00001003963
ChIP-Seq Histone H3K27ac EGA EGAX00001255610 EGAD00001003963 https://ega-archive.org/datasets/EGAD00001003963
ChIP-Seq ChIP-Seq Input EGA EGAX00001255609 EGAD00001003963 https://ega-archive.org/datasets/EGAD00001003963
Bisulfite-Seq DNA Methylation EGA EGAX00001272563 EGAD00001003963 https://ega-archive.org/datasets/EGAD00001003963
RNA-Seq mRNA-Seq EGA EGAX00001248548 EGAD00001003963 https://ega-archive.org/datasets/EGAD00001003963
miRNA-Seq smRNA-Seq EGA EGAX00001248511 EGAD00001003963 https://ega-archive.org/datasets/EGAD00001003963