IHECRE00000013.4 LIVE IHEC harmonized v2.0 JSON  

Species Homo sapiens
Type Single donor
Status Complete
Project BLUEPRINT
Description alternatively activated macrophage from venous blood of donor: S00BS4
Previous versions IHECRE00000013.3   IHECRE00000013.2   IHECRE00000013.1  

Metadata


Biomaterial type primary cell culture
Cell type alternatively activated macrophage
Tissue type venous blood
Cell markers CCR7+ CD25+ CD14+ CD40+ CD206+ CD36+ CD45+
Biospecimen
    Broad label macrophage
    Intermediate label macrophage
    Curated label Macrophage
    Ontology curie CL:0000890
Biospecimen disease
    Broad label Healthy/None
    Ontology curie NCIM:C0549184
Donor
    Type Single donor
    ID S00BS4
    Age 0-5
    Age unit year
    Life stage adult
    Sex female

Experimental data


Assay Type Experiment Type Archive Primary ID Secondary ID URL
ChIP-Seq Histone H3K36me3 EGA EGAX00001171901 EGAD00001002317 https://ega-archive.org/datasets/EGAD00001002317
ChIP-Seq Histone H3K4me3 EGA EGAX00001171932 EGAD00001002317 https://ega-archive.org/datasets/EGAD00001002317
ChIP-Seq Histone H3K27ac EGA EGAX00001171917 EGAD00001002317 https://ega-archive.org/datasets/EGAD00001002317
RNA-Seq total-RNA-Seq EGA EGAX00001232207 EGAD00001002387 https://ega-archive.org/datasets/EGAD00001002387
ChIP-Seq ChIP-Seq Input EGA EGAX00001171936 EGAD00001002317 https://ega-archive.org/datasets/EGAD00001002317
ChIP-Seq Histone H3K27me3 EGA EGAX00001171903 EGAD00001002317 https://ega-archive.org/datasets/EGAD00001002317
ChIP-Seq Histone H3K4me1 EGA EGAX00001171902 EGAD00001002317 https://ega-archive.org/datasets/EGAD00001002317
Bisulfite-Seq DNA Methylation EGA EGAX00001208459 EGAD00001002305 https://ega-archive.org/datasets/EGAD00001002305
ChIP-Seq Histone H3K9me3 EGA EGAX00001171904 EGAD00001002317 https://ega-archive.org/datasets/EGAD00001002317