IHECRE00000013.2 PREVIOUS JSON  

Species Homo sapiens
Type Single donor
Status Partial
Project BLUEPRINT
Description alternatively activated macrophage from Venous blood of S00BS4
Live version IHECRE00000013.4
Previous versions IHECRE00000013.1  

Metadata


Biomaterial type Primary Cell Culture
Donor id S00BS4
Disease ontology uri NA
Donor ethnicity NA
Donor id S00BS4
Passage if expanded http://www.blueprint-epigenome.eu/UserFiles/file/Protocols/UCAM_BluePrint_Macrophage.pdf
Donor sex Female
Gender female
Tissue type Venous blood
Taxon id 9606
Disease None
Sample ontology uri http://purl.obolibrary.org/obo/CL_0000890;http://purl.obolibrary.org/obo/UBERON_0013756
Donor age 0
Culture conditions http://www.blueprint-epigenome.eu/UserFiles/file/Protocols/UCAM_BluePrint_Macrophage.pdf
Phenotype CL:0000890;EFO:0000761;UBERON:0013756
Cell type alternatively activated macrophage
Markers http://www.blueprint-epigenome.eu/index.cfm?p=7BF8A4B6-F4FE-861A-2AD57A08D63D0B58
Donor health status NA
Biomaterial provider NIHR Cambridge BioResource

Experimental data


Assay Type Experiment Type Archive Primary ID Secondary ID URL
ChIP-Seq ChIP-Seq Input EGA EGAX00001171936 EGAD00001001514 https://ega-archive.org/datasets/EGAD00001001514
RNA-Seq mRNA-seq EGA EGAX00001232207 EGAD00001001586 https://ega-archive.org/datasets/EGAD00001001586
Bisulfite-Seq DNA Methylation EGA EGAX00001208459 EGAD00001001498 https://ega-archive.org/datasets/EGAD00001001498
ChIP-Seq Histone H3K27me3 EGA EGAX00001171903 EGAD00001001514 https://ega-archive.org/datasets/EGAD00001001514
ChIP-Seq Histone H3K9me3 EGA EGAX00001171904 EGAD00001001514 https://ega-archive.org/datasets/EGAD00001001514
ChIP-Seq Histone H3K4me3 EGA EGAX00001171932 EGAD00001001514 https://ega-archive.org/datasets/EGAD00001001514