IHECRE00000011.4 LIVE IHEC harmonized v2.0 JSON
| Species | Homo sapiens |
| Type | Single donor |
| Status | Partial |
| Project | BLUEPRINT |
| Description | Acute Promyelocytic Leukemia - ATRA from bone marrow of donor: pz 289 |
| Previous versions | IHECRE00000011.3 IHECRE00000011.2 IHECRE00000011.1 |
Metadata
| Biomaterial type | primary cell |
| Cell type | myeloid cell |
| Tissue type | bone marrow |
| Biospecimen | |
| Broad label | myeloid cell |
| Intermediate label | myeloid cell |
| Curated label | Acute Promyelocytic Leukemia |
| Ontology curie | CL:0000763 |
| Biospecimen disease | |
| Broad label | Cancer |
| Intermediate label | Leukemia |
| Curated label | Acute Promyelocytic Leukemia with t(15;17)(q24.1;q21.2); PML-RARA |
| Ontology curie | NCIM:C0023487 |
| Donor | |
| Type | Single donor |
| ID | pz 289 |
| Age | 30-35 |
| Age unit | year |
| Life stage | adult |
| Sex | female |
| Health status | Acute Promyelocytic Leukemia with t(15;17)(q24.1;q21.2); PML-RARA |
| Health status ontology curie | NCIM:C0023487 |
Experimental data
| Assay Type | Experiment Type | Archive | Primary ID | Secondary ID | URL |
|---|---|---|---|---|---|
| ChIP-Seq | Histone H3K36me3 | EGA | EGAX00001138955 | EGAD00001002319 | https://ega-archive.org/datasets/EGAD00001002319 |
| ChIP-Seq | Histone H3K4me3 | EGA | EGAX00001171912 | EGAD00001002319 | https://ega-archive.org/datasets/EGAD00001002319 |
| ChIP-Seq | Histone H3K27ac | EGA | EGAX00001138909 | EGAD00001002319 | https://ega-archive.org/datasets/EGAD00001002319 |
| RNA-Seq | total-RNA-Seq | EGA | EGAX00001185206 | EGAD00001002356 | https://ega-archive.org/datasets/EGAD00001002356 |
| ChIP-Seq | Histone H3K4me1 | EGA | EGAX00001138956 | EGAD00001002319 | https://ega-archive.org/datasets/EGAD00001002319 |
| ChIP-Seq | Histone H3K27me3 | EGA | EGAX00001138957 | EGAD00001002319 | https://ega-archive.org/datasets/EGAD00001002319 |