IHECRE00000011.3 PREVIOUS JSON
| Species | Homo sapiens |
| Type | Single donor |
| Status | Partial |
| Project | BLUEPRINT |
| Description | Acute Promyelocytic Leukemia - ATRA from bone marrow of donor: pz 289 |
| Live version | IHECRE00000011.4 |
| Previous versions | IHECRE00000011.2 IHECRE00000011.1 |
Metadata
| Biomaterial type | Primary Cell |
| Disease ontology uri | http://ncimeta.nci.nih.gov/ncimbrowser/ConceptReport.jsp?dictionary=NCI%20MetaThesaurus&code=C0023487 |
| Donor id | pz 289 |
| Donor ethnicity | Caucasian |
| Passage if expanded | NA |
| Genetic characteristics | Translocation t(15;17) |
| Donor sex | Female |
| Gender | female |
| Tissue type | bone marrow |
| Taxon id | 9606 |
| Disease | Acute Promyelocytic Leukemia |
| Sample ontology uri | http://purl.obolibrary.org/obo/CL_0000763 |
| Donor age | 30 - 35 |
| Treatment | ATRA |
| Phenotype | CL_0000763;C0023487;UBERON_0002371 |
| Cell type | myeloid cell |
| Markers | NA |
| Biomaterial provider | Prof: Lucia Altucci (SECONDA UNIVERSITA' di NAPOLI- IT) |
| Donor health status | Acute Promyelocytic Leukemia |
Experimental data
| Assay Type | Experiment Type | Archive | Primary ID | Secondary ID | URL |
|---|---|---|---|---|---|
| ChIP-Seq | Histone H3K36me3 | EGA | EGAX00001138955 | EGAD00001002319 | https://ega-archive.org/datasets/EGAD00001002319 |
| ChIP-Seq | Histone H3K4me3 | EGA | EGAX00001171912 | EGAD00001002319 | https://ega-archive.org/datasets/EGAD00001002319 |
| ChIP-Seq | Histone H3K27ac | EGA | EGAX00001138909 | EGAD00001002319 | https://ega-archive.org/datasets/EGAD00001002319 |
| RNA-Seq | total-RNA-Seq | EGA | EGAX00001185206 | EGAD00001002356 | https://ega-archive.org/datasets/EGAD00001002356 |
| ChIP-Seq | Histone H3K4me1 | EGA | EGAX00001138956 | EGAD00001002319 | https://ega-archive.org/datasets/EGAD00001002319 |
| ChIP-Seq | Histone H3K27me3 | EGA | EGAX00001138957 | EGAD00001002319 | https://ega-archive.org/datasets/EGAD00001002319 |