alpha-Neu5Ac-(2->8)-alpha-Neu5Ac-(2->3)-beta-Gal-(1->3)-beta-GalNAc-(1->4)-beta-Gal-(1->4)-beta-Glc-(1<->1')-Cer (CHEBI:87990)

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CHEBI:87990 - α-Neu5Ac-(2→8)-α-Neu5Ac-(2→3)-β-Gal-(1→3)-β-GalNAc-(1→4)-β-Gal-(1→4)-β-Glc-(1↔1')-Cer

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ChEBI ID	CHEBI:87990
ChEBI Name	α-Neu5Ac-(2→8)-α-Neu5Ac-(2→3)-β-Gal-(1→3)-β-GalNAc-(1→4)-β-Gal-(1→4)-β-Glc-(1↔1')-Cer
Stars
ASCII Name	alpha-Neu5Ac-(2->8)-alpha-Neu5Ac-(2->3)-beta-Gal-(1->3)-beta-GalNAc-(1->4)-beta-Gal-(1->4)-beta-Glc-(1<->1')-Cer
Definition	A sialotetraosylceramide consisting of a linear hexasaccharide made up from two sialyl residues, two galactose residues, one N-acetylgalactosamine residue and a glucose residue at the reducing end attached to the ceramide portion via a β-linkage.
Last Modified	15 September 2016
Submitter	Steve
Downloads	Molfile

Formula	C67H113N4O39R
Net Charge	0
Average Mass (excl. R groups)	1598.620
Monoisotopic Mass (excl. R groups)	1597.69819
SMILES	*C(=O)N[C@@H](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O[C@@H]3O[C@H](CO)[C@H](O)[C@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O[C@]5(C(=O)O)C[C@H](O)[C@@H](NC(C)=O)[C@]([H])([C@H](O)[C@@H](CO)O[C@]6(C(=O)O)C[C@H](O)[C@@H](NC(C)=O)[C@]([H])([C@H](O)[C@H](O)CO)O6)O5)[C@H]4O)[C@H]3NC(C)=O)[C@H](O)[C@H]2O)[C@H](O)[C@H]1O)[C@H](O)/C=C/CCCCCCCCCCCCC

Species of Metabolite	Component	Source	Comments
Mus musculus (ncbitaxon:10090)
	-	PubMed (3094941)
	-	PubMed (19425150)	Source: BioModels - MODEL1507180067
Rattus norvegicus (ncbitaxon:10116)	-	PubMed (1761522)

Roles Classification

Biological Roles:

rat metabolite Any mammalian metabolite produced during a metabolic reaction in rat (Rattus norvegicus).

mouse metabolite Any mammalian metabolite produced during a metabolic reaction in a mouse (Mus musculus).

ChEBI Ontology

Outgoing Relation(s)
	α-Neu5Ac-(2→8)-α-Neu5Ac-(2→3)-β-Gal-(1→3)-β-GalNAc-(1→4)-β-Gal-(1→4)-β-Glc-(1↔1')-Cer (CHEBI:87990) has role mouse metabolite (CHEBI:75771)
	α-Neu5Ac-(2→8)-α-Neu5Ac-(2→3)-β-Gal-(1→3)-β-GalNAc-(1→4)-β-Gal-(1→4)-β-Glc-(1↔1')-Cer (CHEBI:87990) has role rat metabolite (CHEBI:86264)
	α-Neu5Ac-(2→8)-α-Neu5Ac-(2→3)-β-Gal-(1→3)-β-GalNAc-(1→4)-β-Gal-(1→4)-β-Glc-(1↔1')-Cer (CHEBI:87990) is a sialotetraosylceramide (CHEBI:36543)
	α-Neu5Ac-(2→8)-α-Neu5Ac-(2→3)-β-Gal-(1→3)-β-GalNAc-(1→4)-β-Gal-(1→4)-β-Glc-(1↔1')-Cer (CHEBI:87990) is conjugate acid of α-Neu5Ac-(2→8)-α-Neu5Ac-(2→3)-β-D-Gal-(1→3)-β-D-GalNac-(1→4)-β-D-Gal-(1→4)-β-D-Glc-(1↔1')-Cer(2−) (CHEBI:87787)
Incoming Relation(s)
Incoming Relation(s)	α-Neu5Ac-(2→8)-α-Neu5Ac-(2→3)-β-D-Gal-(1→3)-β-D-GalNac-(1→4)-β-D-Gal-(1→4)-β-D-Glc-(1↔1')-Cer(2−) (CHEBI:87787) is conjugate base of α-Neu5Ac-(2→8)-α-Neu5Ac-(2→3)-β-Gal-(1→3)-β-GalNAc-(1→4)-β-Gal-(1→4)-β-Glc-(1↔1')-Cer (CHEBI:87990)

IUPAC Name
(2S,3R,4E)-2-(acylamino)-3-hydroxyoctadec-4-en-1-yl 5-acetamido-3,5-dideoxy-D-glycero-α-D-galacto-non-2-ulopyranonosyl-(2→8)-5-acetamido-3,5-dideoxy-D-glycero-α-D-galacto-non-2-ulopyranonosyl-(2→3)-β-D-galactopyranosyl-(1→3)-2-acetamido-2-deoxy-β-D-galactopyranosyl-(1→4)-β-D-galactopyranosyl-(1→4)-β-D-glucopyranoside

Synonyms	Source
ganglioside GD1c	ChEBI
α-Neu5Ac-(2→8)-α-Neu5Ac-(2→3)-β-Galp-(1→3)-β-GalpNAc-(1→4)-β-Galp-(1→4)-β-Glcp-(1↔1')-Cer	ChEBI
GD1c	KEGG GLYCAN
(Gal)2 (GalNAc)1 (Glc)1 (Neu5Ac)2 (Cer)1	KEGG GLYCAN
NeuAcα2-8NeuAcα2-3Galβ1-3GalNAcβ1-4Galβ1-4Glcβ-Cer	LIPID MAPS

Manual Xrefs	Databases
G00126	KEGG GLYCAN
LMSP0601BN00	LIPID MAPS

Citations