EMBL-EBI | Chemical Biology | ChEBI

Example searches: iron*, InChI=1S/CH4O/c1-2/h2H,1H3, caffeine | Advanced Search

CHEBI:87042 - seldomycin 5

ChEBI IDCHEBI:87042
ChEBI Nameseldomycin 5
Stars
DefinitionAn aminoglycoside antibiotic that is part of an antimicrobial complex consisting of factors 1,2,3,5 from a soil isolate named Streptomyces hofunensis.
Last Modified31 July 2015
Submitterctparker
DownloadsMolfile
FormulaC18H38N6O7
Net Charge0
Average Mass450.537
Monoisotopic Mass450.28020
SMILESCO[C@@H]1CO[C@H](O[C@@H]2[C@@H](O)[C@H](O[C@H]3O[C@H](CN)C[C@H](O)[C@H]3N)[C@@H](N)C[C@H]2N)[C@H](N)[C@H]1N
InChIInChI=1S/C18H38N6O7/c1-27-10-5-28-17(13(24)12(10)23)30-15-7(20)3-8(21)16(14(15)26)31-18-11(22)9(25)2-6(4-19)29-18/h6-18,25-26H,2-5,19-24H2,1H3/t6-,7+,8-,9-,10+,11+,12-,13+,14+,15-,16+,17+,18+/m0/s1
InChIKeyHJKXMQLJTKUBMG-BAOVJYBRSA-N
Roles Classification
Biological Roles:
bacterial metabolite  Any prokaryotic metabolite produced during a metabolic reaction in bacteria.
antimicrobial drug  A drug used to treat or prevent microbial infections.
antimicrobial agent  A substance that kills or slows the growth of microorganisms, including bacteria, viruses, fungi and protozoans.
Application:
antimicrobial drug  A drug used to treat or prevent microbial infections.
ChEBI Ontology
Outgoing Relation(s)
seldomycin 5 (CHEBI:87042) has role antimicrobial drug (CHEBI:36043)
seldomycin 5 (CHEBI:87042) has role bacterial metabolite (CHEBI:76969)
seldomycin 5 (CHEBI:87042) is a amino cyclitol glycoside (CHEBI:22479)
seldomycin 5 (CHEBI:87042) is a aminoglycoside antibiotic (CHEBI:22507)
IUPAC Name 
(1R,2R,3S,4R,6S)-4,6-diamino-3-[(2,3-diamino-2,3-dideoxy-4-O-methyl-α-D-xylopyranosyl)oxy]-2-hydroxycyclohexyl 2,6-diamino-2,4,6-trideoxy-α-D-xylo-hexopyranoside
Manual XrefsDatabases
US4189569Patent
Registry NumbersSources
CAS:75635-18-6ChemIDplus
Citations