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CHEBI:85394 - 5'-UAUGUACACUACA-3'

ChEBI IDCHEBI:85394
ChEBI Name5'-UAUGUACACUACA-3'
Stars
DefinitionA synthetic RNA fragment comprised of five adenosine, one guanosine, four uridine and three cytidine residues connected by 3'→5' phosphodiester linkages in the sequence U-G-G-G-A-A-G-A-C-A.
Last Modified7 April 2015
SubmitterMarcus Ennis
DownloadsMolfile
FormulaC123H153N47O88P12
Net Charge0
Average Mass4069.506
Monoisotopic Mass4067.57933
SMILESNc1ccn([C@@H]2O[C@H](COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4cnc5c(N)ncnc54)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4ccc(N)nc4=O)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4cnc5c(N)ncnc54)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4ccc(=O)nc4=O)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4cnc5c(=O)nc(N)nc54)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4ccc(=O)nc4=O)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4cnc5c(N)ncnc54)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4ccc(=O)nc4=O)O[C@@H]3CO)[C@@H](OP(=O)(O)OC[C@H]3O[C@@H](n4ccc(=O)nc4=O)[C@H](O)[C@@H]3OP(=O)(O)OC[C@H]3O[C@@H](n4cnc5c(N)ncnc54)[C@H](O)[C@@H]3OP(=O)(O)OC[C@H]3O[C@@H](n4ccc(N)nc4=O)[C@H](O)[C@@H]3OP(=O)(O)OC[C@H]3O[C@@H](n4cnc5c(N)ncnc54)[C@H](O)[C@@H]3O)[C@H]2O)c(=O)n1
InChIInChI=1S/C123H153N47O88P12/c124-52-1-8-158(117(191)149-52)105-68(179)80(248-259(198,199)222-16-40-65(176)66(177)103(235-40)165-33-143-59-91(127)133-28-138-96(59)165)41(236-105)17-225-266(212,213)255-88-49(244-113(76(88)187)168-36-146-62-94(130)136-31-141-99(62)168)25-231-263(206,207)251-83-44(239-108(71(83)182)162-12-5-56(173)153-121(162)195)20-224-261(202,203)249-81-42(237-106(69(81)180)159-9-2-53(125)150-118(159)192)18-226-267(214,215)256-87-48(243-112(75(87)186)167-35-145-61-93(129)135-30-140-98(61)167)24-230-262(204,205)250-82-43(238-107(70(82)181)160-10-3-54(126)151-119(160)193)19-227-268(216,217)257-89-50(245-114(77(89)188)169-37-147-63-95(131)137-32-142-100(63)169)26-232-264(208,209)252-84-46(241-109(72(84)183)163-13-6-57(174)154-122(163)196)22-229-270(220,221)258-90-51(246-115(78(90)189)170-38-148-64-101(170)156-116(132)157-102(64)190)27-233-265(210,211)253-85-45(240-110(73(85)184)164-14-7-58(175)155-123(164)197)21-228-269(218,219)254-86-47(242-111(74(86)185)166-34-144-60-92(128)134-29-139-97(60)166)23-223-260(200,201)247-79-39(15-171)234-104(67(79)178)161-11-4-55(172)152-120(161)194/h1-14,28-51,65-90,103-115,171,176-189H,15-27H2,(H,198,199)(H,200,201)(H,202,203)(H,204,205)(H,206,207)(H,208,209)(H,210,211)(H,212,213)(H,214,215)(H,216,217)(H,218,219)(H,220,221)(H2,124,149,191)(H2,125,150,192)(H2,126,151,193)(H2,127,133,138)(H2,128,134,139)(H2,129,135,140)(H2,130,136,141)(H2,131,137,142)(H,152,172,194)(H,153,173,195)(H,154,174,196)(H,155,175,197)(H3,132,156,157,190)/t39-,40-,41-,42-,43-,44-,45-,46-,47-,48-,49-,50-,51-,65-,66-,67-,68-,69-,70-,71-,72-,73-,74-,75-,76-,77-,78-,79-,80-,81-,82-,83-,84-,85-,86-,87-,88-,89-,90-,103-,104-,105-,106-,107-,108-,109-,110-,111-,112-,113-,114-,115-/m1/s1
InChIKeyVYBPDSVUUVISDY-YQEYYAQJSA-N
ChEBI Ontology
Outgoing Relation(s)
5'-UAUGUACACUACA-3' (CHEBI:85394) is a RNA fragment (CHEBI:82726)
IUPAC Name 
U-A-U-G-U-A-C-A-C-U-A-C-A
Synonym  Source
UpApUpGpUpApCpApCpUpApCpAChEBI
Citations