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CHEBI:82727 - 5'-GAAACAC-3' RNA fragment

ChEBI IDCHEBI:82727
ChEBI Name5'-GAAACAC-3' RNA fragment
Stars
DefinitionAn RNA fragment comprised of one guanosine, four adenosine and two cytidine residues connected by 3'→5' phosphodiester linkages in the sequence G-A-A-A-C-A-C.
Last Modified7 April 2015
SubmitterMarcus Ennis
DownloadsMolfile
FormulaC68H85N31O43P6
Net Charge0
Average Mass2210.446
Monoisotopic Mass2209.38432
SMILESNc1ccn([C@@H]2O[C@H](COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4cnc5c(N)ncnc54)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4ccc(N)nc4=O)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4cnc5c(N)ncnc54)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4cnc5c(N)ncnc54)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4cnc5c(N)ncnc54)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4cnc5c(=O)nc(N)nc54)O[C@@H]3CO)[C@@H](O)[C@H]2O)c(=O)n1
InChIInChI=1S/C68H85N31O43P6/c69-28-1-3-93(67(110)89-28)59-36(102)35(101)22(131-59)6-124-143(112,113)139-45-25(134-61(39(45)105)95-16-84-30-49(71)76-12-80-53(30)95)9-127-145(116,117)138-44-23(132-60(38(44)104)94-4-2-29(70)90-68(94)111)7-126-146(118,119)140-47-26(135-63(41(47)107)97-18-86-32-51(73)78-14-82-55(32)97)10-129-148(122,123)142-48-27(136-64(42(48)108)98-19-87-33-52(74)79-15-83-56(33)98)11-128-147(120,121)141-46-24(133-62(40(46)106)96-17-85-31-50(72)77-13-81-54(31)96)8-125-144(114,115)137-43-21(5-100)130-65(37(43)103)99-20-88-34-57(99)91-66(75)92-58(34)109/h1-4,12-27,35-48,59-65,100-108H,5-11H2,(H,112,113)(H,114,115)(H,116,117)(H,118,119)(H,120,121)(H,122,123)(H2,69,89,110)(H2,70,90,111)(H2,71,76,80)(H2,72,77,81)(H2,73,78,82)(H2,74,79,83)(H3,75,91,92,109)/t21-,22-,23-,24-,25-,26-,27-,35-,36-,37-,38-,39-,40-,41-,42-,43-,44-,45-,46-,47-,48-,59-,60-,61-,62-,63-,64-,65-/m1/s1
InChIKeyKSBLDVQNLPQVKL-IBQVNEHHSA-N
ChEBI Ontology
Outgoing Relation(s)
5'-GAAACAC-3' RNA fragment (CHEBI:82727) is a RNA fragment (CHEBI:82726)
IUPAC Name 
G-A-A-A-C-A-C
Synonym  Source
GpApApApCpApCChEBI
Citations