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CHEBI:78720 - tetramethylrhodamine ethyl ester perchlorate

ChEBI IDCHEBI:78720
ChEBI Nametetramethylrhodamine ethyl ester perchlorate
Stars
DefinitionAn organic perchlorate salt that has tetramethylrhodamine ethyl ester(1+) as the cation. It is used as a cell-permeant, cationic, red-orange fluorescent dye that is readily sequestered by active mitochondria.
Last Modified6 June 2014
SubmitterGareth Owen
DownloadsMolfile
FormulaC26H27N2O3.ClO4
Net Charge0
Average Mass514.962
Monoisotopic Mass514.15068
SMILESCCOC(=O)c1ccccc1-c1c2ccc(=[N+](C)C)cc-2oc2cc(N(C)C)ccc12.O=Cl(=O)(=O)[O-]
InChIInChI=1S/C26H27N2O3.ClHO4/c1-6-30-26(29)20-10-8-7-9-19(20)25-21-13-11-17(27(2)3)15-23(21)31-24-16-18(28(4)5)12-14-22(24)25;2-1(3,4)5/h7-16H,6H2,1-5H3;(H,2,3,4,5)/q+1;/p-1
InChIKeyNBAOBNBFGNQAEJ-UHFFFAOYSA-M
Roles Classification
Applications:
fluorochrome  A fluorescent dye used to stain biological specimens.
reagent  A substance used in a chemical reaction to detect, measure, examine, or produce other substances.
dye 
ChEBI Ontology
Outgoing Relation(s)
tetramethylrhodamine ethyl ester perchlorate (CHEBI:78720) has part tetramethylrhodamine ethyl ester(1+) (CHEBI:78721)
tetramethylrhodamine ethyl ester perchlorate (CHEBI:78720) has role fluorochrome (CHEBI:51217)
tetramethylrhodamine ethyl ester perchlorate (CHEBI:78720) has role reagent (CHEBI:33893)
tetramethylrhodamine ethyl ester perchlorate (CHEBI:78720) is a organic perchlorate salt (CHEBI:52165)
tetramethylrhodamine ethyl ester perchlorate (CHEBI:78720) is a xanthene dye (CHEBI:37929)
Synonym  Source
TMRE perchlorateChEBI
Registry NumbersSources
Reaxys:8180460Reaxys
Citations