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CHEBI:76792 - 5-(hydroxymethyl)cytosine

ChEBI IDCHEBI:76792
ChEBI Name5-(hydroxymethyl)cytosine
Stars
DefinitionA nucleobase analogue that is cytosine in which the hydrogen at position 5 is replaced by a hydroxymethyl group.
Last Modified30 March 2016
Submitterbroose.reactome@gmail.com
DownloadsMolfile
FormulaC5H7N3O2
Net Charge0
Average Mass141.130
Monoisotopic Mass141.05383
SMILESNc1nc(=O)ncc1CO
InChIInChI=1S/C5H7N3O2/c6-4-3(2-9)1-7-5(10)8-4/h1,9H,2H2,(H3,6,7,8,10)
InChIKeyRYVNIFSIEDRLSJ-UHFFFAOYSA-N
Wikipedia
Roles Classification
Chemical Role:
Bronsted base  A molecular entity capable of accepting a hydron from a donor (Brønsted acid).
Biological Roles:
human metabolite  Any mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens).
mouse metabolite  Any mammalian metabolite produced during a metabolic reaction in a mouse (Mus musculus).
ChEBI Ontology
Outgoing Relation(s)
5-(hydroxymethyl)cytosine (CHEBI:76792) has functional parent cytosine (CHEBI:16040)
5-(hydroxymethyl)cytosine (CHEBI:76792) has role human metabolite (CHEBI:77746)
5-(hydroxymethyl)cytosine (CHEBI:76792) has role mouse metabolite (CHEBI:75771)
5-(hydroxymethyl)cytosine (CHEBI:76792) is a aminopyrimidine (CHEBI:38338)
5-(hydroxymethyl)cytosine (CHEBI:76792) is a aromatic primary alcohol (CHEBI:33857)
5-(hydroxymethyl)cytosine (CHEBI:76792) is a nucleobase analogue (CHEBI:67142)
5-(hydroxymethyl)cytosine (CHEBI:76792) is a pyrimidone (CHEBI:38337)
Incoming Relation(s)
5-(β-D-glucosylmethyl)cytosine (CHEBI:131616) has functional parent 5-(hydroxymethyl)cytosine (CHEBI:76792)
IUPAC Name 
4-amino-5-(hydroxymethyl)pyrimidin-2(1H)-one
Synonyms  Source
4-Amino-5-(hydroxymethyl)-2(1H)-pyrimidinoneChemIDplus
5-hydroxymethylcytosineChEBI
Manual XrefsDatabases
CPD-15531MetaCyc
5-HydroxymethylcytosineWikipedia
Registry NumbersSources
Reaxys:125478Reaxys
CAS:1123-95-1ChemIDplus
Citations