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CHEBI:76403 - 5'-d(pGpG)-3'

ChEBI IDCHEBI:76403
ChEBI Name5'-d(pGpG)-3'
Stars
DefinitionA single-stranded DNA oligonucleotide comprising two 2'-deoxyguanosine residues connected by a 3'→5 linkage and with a phosphoric group at the 5'-terminus.
Last Modified10 June 2016
SubmitterMarcus Ennis
DownloadsMolfile
FormulaC20H26N10O13P2
Net Charge0
Average Mass676.433
Monoisotopic Mass676.11560
SMILESNc1nc(=O)c2ncn([C@H]3C[C@H](OP(=O)(O)OC[C@H]4O[C@@H](n5cnc6c(=O)nc(N)nc65)C[C@@H]4O)[C@@H](COP(=O)(O)O)O3)c2n1
InChIInChI=1S/C20H26N10O13P2/c21-19-25-15-13(17(32)27-19)23-5-29(15)11-1-7(31)9(41-11)3-40-45(37,38)43-8-2-12(42-10(8)4-39-44(34,35)36)30-6-24-14-16(30)26-20(22)28-18(14)33/h5-12,31H,1-4H2,(H,37,38)(H2,34,35,36)(H3,21,25,27,32)(H3,22,26,28,33)/t7-,8-,9+,10+,11+,12+/m0/s1
InChIKeyFHNURBISTWFIJX-WGWHJZDNSA-N
Species of MetaboliteComponentSourceComments
Mycoplasma genitalium (ncbitaxon:2097) - PubMed (22817898)
Roles Classification
Biological Role:
Mycoplasma genitalium metabolite  Any bacterial metabolite produced during a metabolic reaction in Mycoplasma genitalium.
ChEBI Ontology
Outgoing Relation(s)
5'-d(pGpG)-3' (CHEBI:76403) has role Mycoplasma genitalium metabolite (CHEBI:131604)
5'-d(pGpG)-3' (CHEBI:76403) is a 5'-phospho-(3'→5')-dinucleotide (CHEBI:48638)
5'-d(pGpG)-3' (CHEBI:76403) is a single-stranded DNA oligonucleotide (CHEBI:75153)
Incoming Relation(s)
cis-diammine[d(pGpG)]platinum (CHEBI:76406) has part 5'-d(pGpG)-3' (CHEBI:76403)
IUPAC Name 
2'-deoxyguanylyl-(5'→3')-2'-deoxy-5'-guanylic acid
Synonyms  Source
pdGpdGChEBI
d(pG-G)ChEBI
5'-d(pGG)-3'ChEBI
dpG-GChEBI
dpG-dpGChEBI
dpGdpGChEBI
Registry NumbersSources
Reaxys:1208704Reaxys
Citations