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CHEBI:76000 - α-D-GalNAc-(1→2)-β-D-Man-(1→4)-[β-D-Glc-(1→2)]-α-D-Man-(1→5)-α-Kdo

ChEBI IDCHEBI:76000
ChEBI Nameα-D-GalNAc-(1→2)-β-D-Man-(1→4)-[β-D-Glc-(1→2)]-α-D-Man-(1→5)-α-Kdo
Stars
ASCII Namealpha-D-GalNAc-(1->2)-beta-D-Man-(1->4)-[beta-D-Glc-(1->2)]-alpha-D-Man-(1->5)-alpha-Kdo
DefinitionA branched amino pentasaccharide consisting of an N-acetyl-α-D-galactosaminyl-(1→2)-β-D-mannosyl-(1→4)-α-D-mannosyl-(1→5)-3-deoxy-α-D-manno-oct-2-ulosonic acid tetrasaccharide chain, to the α-D-mannosyl residue of which is also linked β(1→2) a D-glucosyl residue. Epitope of Francisella tularensis.
Last Modified21 October 2013
SubmitterMarcus Ennis
DownloadsMolfile
FormulaC34H57NO28
Net Charge0
Average Mass927.809
Monoisotopic Mass927.30671
SMILES[H][C@]1([C@H](O)CO)O[C@@](O)(C(=O)O)C[C@@H](O)[C@H]1O[C@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]2O[C@H]2O[C@H](CO)[C@H](O)[C@H](O)[C@H]2NC(C)=O)[C@H](O)[C@@H]1O[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O
InChIInChI=1S/C34H57NO28/c1-8(41)35-15-19(47)16(44)11(4-37)55-29(15)61-27-21(49)18(46)13(6-39)57-31(27)60-26-14(7-40)58-32(28(23(26)51)62-30-22(50)20(48)17(45)12(5-38)56-30)59-24-9(42)2-34(54,33(52)53)63-25(24)10(43)3-36/h9-32,36-40,42-51,54H,2-7H2,1H3,(H,35,41)(H,52,53)/t9-,10-,11-,12-,13-,14-,15-,16+,17-,18-,19-,20+,21+,22-,23+,24-,25-,26-,27+,28+,29-,30+,31+,32-,34-/m1/s1
InChIKeyXVAPYJWHIDKJRH-AYLVRZIOSA-N
Roles Classification
Biological Role:
epitope  The biological role played by a material entity when bound by a receptor of the adaptive immune system. Specific site on an antigen to which an antibody binds.
ChEBI Ontology
Outgoing Relation(s)
α-D-GalNAc-(1→2)-β-D-Man-(1→4)-[β-D-Glc-(1→2)]-α-D-Man-(1→5)-α-Kdo (CHEBI:76000) has role epitope (CHEBI:53000)
α-D-GalNAc-(1→2)-β-D-Man-(1→4)-[β-D-Glc-(1→2)]-α-D-Man-(1→5)-α-Kdo (CHEBI:76000) is a amino pentasaccharide (CHEBI:59268)
IUPAC Name 
2-deoxy-2-acetamido-α-D-galactopyranosyl-(1→2)-β-D-mannopyranosyl-(1→4)-[β-D-glucopyranosyl-(1→2)]-α-D-mannopyranosyl-(1→5)-3-deoxy-α-D-manno-oct-2-ulopyranosonic acid
Synonyms  Source
N-acetyl-α-D-galactosaminyl-(1→2)-β-D-mannosyl-(1→4)-[β-D-glucosyl-(1→2)]-α-D-mannosyl-(1→5)-3-deoxy-α-D-manno-oct-2-ulosonic acidJCBN
α-D-GalpNAc-(1→2)-β-D-Manp-(1→4)-[β-D-Glcp-(1→2)]-α-D-Manp-(1→5)-α-KdoJCBN