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CHEBI:75942 - 5'-GTAACCGAAATCGGTTGA-3'

ChEBI IDCHEBI:75942
ChEBI Name5'-GTAACCGAAATCGGTTGA-3'
Stars
DefinitionA single-stranded DNA oligonucleotide comprised of six deoxyadenosine, three deoxycytidine, four thymidine and five deoxyguanidine residues connected by 3'→5' phosphodiester linkages in the sequence GTAACCGAAATCGGTTGA.
Last Modified20 November 2013
SubmitterMarcus Ennis
DownloadsMolfile
FormulaC177H221N72O104P17
Net Charge0
Average Mass5547.673
Monoisotopic Mass5544.97573
SMILESCc1cn([C@H]2C[C@H](OP(=O)(O)OC[C@H]3O[C@@H](n4cnc5c(=O)nc(N)nc54)C[C@@H]3OP(=O)(O)OC[C@H]3O[C@@H](n4cnc5c(N)ncnc54)C[C@@H]3O)[C@@H](COP(=O)(O)O[C@H]3C[C@H](n4cc(C)c(=O)nc4=O)O[C@@H]3COP(=O)(O)O[C@H]3C[C@H](n4cnc5c(=O)nc(N)nc54)O[C@@H]3COP(=O)(O)O[C@H]3C[C@H](n4cnc5c(=O)nc(N)nc54)O[C@@H]3COP(=O)(O)O[C@H]3C[C@H](n4ccc(N)nc4=O)O[C@@H]3COP(=O)(O)O[C@H]3C[C@H](n4cc(C)c(=O)nc4=O)O[C@@H]3COP(=O)(O)O[C@H]3C[C@H](n4cnc5c(N)ncnc54)O[C@@H]3COP(=O)(O)O[C@H]3C[C@H](n4cnc5c(N)ncnc54)O[C@@H]3COP(=O)(O)O[C@H]3C[C@H](n4cnc5c(N)ncnc54)O[C@@H]3COP(=O)(O)O[C@H]3C[C@H](n4cnc5c(=O)nc(N)nc54)O[C@@H]3COP(=O)(O)O[C@H]3C[C@H](n4ccc(N)nc4=O)O[C@@H]3COP(=O)(O)O[C@H]3C[C@H](n4ccc(N)nc4=O)O[C@@H]3COP(=O)(O)O[C@H]3C[C@H](n4cnc5c(N)ncnc54)O[C@@H]3COP(=O)(O)O[C@H]3C[C@H](n4cnc5c(N)ncnc54)O[C@@H]3COP(=O)(O)O[C@H]3C[C@H](n4cc(C)c(=O)nc4=O)O[C@@H]3COP(=O)(O)O[C@H]3C[C@H](n4cnc5c(=O)nc(N)nc54)O[C@@H]3CO)O2)c(=O)nc1=O
InChIInChI=1S/C177H221N72O104P17/c1-68-29-235(174(264)228-157(68)252)115-16-77(95(324-115)38-303-355(270,271)337-73-12-124(319-90(73)33-250)245-63-210-135-152(245)218-166(187)223-161(135)256)343-361(282,283)310-42-99-83(22-121(328-99)242-60-207-132-143(184)195-54-201-149(132)242)348-366(292,293)311-43-100-81(20-119(329-100)240-58-205-130-141(182)193-52-199-147(130)240)346-363(286,287)306-37-94-74(13-112(323-94)232-8-5-108(178)215-171(232)261)338-356(272,273)304-35-92-75(14-113(321-92)233-9-6-109(179)216-172(233)262)339-357(274,275)315-48-105-88(27-127(334-105)248-66-213-138-155(248)221-169(190)226-164(138)259)352-369(298,299)314-46-103-85(24-123(332-103)244-62-209-134-145(186)197-56-203-151(134)244)350-368(296,297)313-45-102-84(23-122(331-102)243-61-208-133-144(185)196-55-202-150(133)243)349-367(294,295)312-44-101-82(21-120(330-101)241-59-206-131-142(183)194-53-200-148(131)241)347-364(288,289)308-40-97-78(17-116(326-97)236-30-69(2)158(253)229-175(236)265)341-359(278,279)305-36-93-76(15-114(322-93)234-10-7-110(180)217-173(234)263)340-358(276,277)316-49-106-89(28-128(335-106)249-67-214-139-156(249)222-170(191)227-165(139)260)353-370(300,301)318-50-107-87(26-126(336-107)247-65-212-137-154(247)220-168(189)225-163(137)258)351-365(290,291)309-41-98-79(18-117(327-98)237-31-70(3)159(254)230-176(237)266)342-360(280,281)307-39-96-80(19-118(325-96)238-32-71(4)160(255)231-177(238)267)344-362(284,285)317-47-104-86(25-125(333-104)246-64-211-136-153(246)219-167(188)224-162(136)257)345-354(268,269)302-34-91-72(251)11-111(320-91)239-57-204-129-140(181)192-51-198-146(129)239/h5-10,29-32,51-67,72-107,111-128,250-251H,11-28,33-50H2,1-4H3,(H,268,269)(H,270,271)(H,272,273)(H,274,275)(H,276,277)(H,278,279)(H,280,281)(H,282,283)(H,284,285)(H,286,287)(H,288,289)(H,290,291)(H,292,293)(H,294,295)(H,296,297)(H,298,299)(H,300,301)(H2,178,215,261)(H2,179,216,262)(H2,180,217,263)(H2,181,192,198)(H2,182,193,199)(H2,183,194,200)(H2,184,195,201)(H2,185,196,202)(H2,186,197,203)(H,228,252,264)(H,229,253,265)(H,230,254,266)(H,231,255,267)(H3,187,218,223,256)(H3,188,219,224,257)(H3,189,220,225,258)(H3,190,221,226,259)(H3,191,222,227,260)/t72-,73-,74-,75-,76-,77-,78-,79-,80-,81-,82-,83-,84-,85-,86-,87-,88-,89-,90+,91+,92+,93+,94+,95+,96+,97+,98+,99+,100+,101+,102+,103+,104+,105+,106+,107+,111+,112+,113+,114+,115+,116+,117+,118+,119+,120+,121+,122+,123+,124+,125+,126+,127+,128+/m0/s1
InChIKeyBNHHEPYCYUJYRH-BWPFUMSESA-N
ChEBI Ontology
Outgoing Relation(s)
5'-GTAACCGAAATCGGTTGA-3' (CHEBI:75942) is a single-stranded DNA oligonucleotide (CHEBI:75153)
Synonyms  Source
5'-d[GTAACCGAAATCGGTTGA]-3'ChEBI
d(G-T-A-A-C-C-G-A-A-A-T-C-G-G-T-T-G-A)ChEBI
d(GTAACCGAAATCGGTTGA)ChEBI
5'-GpTpApApCpCpGpApApApTpCpGpGpTpTpGpA-3'ChEBI
Citations