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CHEBI:75829 - 5'-CTGCAGAATTCTGGTACCA-3'

ChEBI IDCHEBI:75829
ChEBI Name5'-CTGCAGAATTCTGGTACCA-3'
Stars
DefinitionA single-stranded DNA oligonucleotide comprised of five deoxyadenosine, five deoxycytidine, five thymidine and four deoxyguanidine residues connected by 3'→5' phosphodiester linkages in the sequence CTGCAGAATTCTGGTACCA.
Last Modified20 November 2013
SubmitterMarcus Ennis
DownloadsMolfile
FormulaC185H234N70O112P18
Net Charge0
Average Mass5787.817
Monoisotopic Mass5785.00438
SMILESCc1cn([C@H]2C[C@H](OP(=O)(O)OC[C@H]3O[C@@H](n4cnc5c(=O)nc(N)nc54)C[C@@H]3OP(=O)(O)OC[C@H]3O[C@@H](n4ccc(N)nc4=O)C[C@@H]3OP(=O)(O)OC[C@H]3O[C@@H](n4cnc5c(N)ncnc54)C[C@@H]3OP(=O)(O)OC[C@H]3O[C@@H](n4cnc5c(=O)nc(N)nc54)C[C@@H]3OP(=O)(O)OC[C@H]3O[C@@H](n4cnc5c(N)ncnc54)C[C@@H]3OP(=O)(O)OC[C@H]3O[C@@H](n4cnc5c(N)ncnc54)C[C@@H]3OP(=O)(O)OC[C@H]3O[C@@H](n4cc(C)c(=O)nc4=O)C[C@@H]3OP(=O)(O)OC[C@H]3O[C@@H](n4cc(C)c(=O)nc4=O)C[C@@H]3OP(=O)(O)OC[C@H]3O[C@@H](n4ccc(N)nc4=O)C[C@@H]3OP(=O)(O)OC[C@H]3O[C@@H](n4cc(C)c(=O)nc4=O)C[C@@H]3OP(=O)(O)OC[C@H]3O[C@@H](n4cnc5c(=O)nc(N)nc54)C[C@@H]3OP(=O)(O)OC[C@H]3O[C@@H](n4cnc5c(=O)nc(N)nc54)C[C@@H]3OP(=O)(O)OC[C@H]3O[C@@H](n4cc(C)c(=O)nc4=O)C[C@@H]3OP(=O)(O)OC[C@H]3O[C@@H](n4cnc5c(N)ncnc54)C[C@@H]3OP(=O)(O)OC[C@H]3O[C@@H](n4ccc(N)nc4=O)C[C@@H]3OP(=O)(O)OC[C@H]3O[C@@H](n4ccc(N)nc4=O)C[C@@H]3OP(=O)(O)OC[C@H]3O[C@@H](n4cnc5c(N)ncnc54)C[C@@H]3O)[C@@H](COP(=O)(O)O[C@H]3C[C@H](n4ccc(N)nc4=O)O[C@@H]3CO)O2)c(=O)nc1=O
InChIInChI=1S/C185H234N70O112P18/c1-73-35-242(181(272)232-163(73)258)127-22-84(103(337-127)46-314-369(279,280)350-79-17-122(331-97(79)40-256)237-11-6-116(186)219-176(237)267)357-376(293,294)327-55-112-93(31-136(346-112)252-69-215-145-159(252)224-172(196)228-168(145)263)364-379(299,300)318-45-102-83(21-126(336-102)241-15-10-120(190)223-180(241)271)354-372(285,286)323-51-108-91(29-134(342-108)250-67-213-143-152(194)203-62-208-157(143)250)363-383(307,308)329-57-114-96(34-139(348-114)255-72-218-148-162(255)227-175(199)231-171(148)266)366-384(309,310)326-54-111-92(30-135(345-111)251-68-214-144-153(195)204-63-209-158(144)251)362-382(305,306)325-53-110-90(28-133(344-110)249-66-212-142-151(193)202-61-207-156(142)249)361-380(301,302)321-49-106-86(24-129(340-106)244-37-75(3)165(260)234-183(244)274)356-374(289,290)320-48-105-85(23-128(339-105)243-36-74(2)164(259)233-182(243)273)355-373(287,288)316-43-100-82(20-125(334-100)240-14-9-119(189)222-179(240)270)353-371(283,284)319-47-104-87(25-130(338-104)245-38-76(4)166(261)235-184(245)275)359-377(295,296)328-56-113-95(33-138(347-113)254-71-217-147-161(254)226-174(198)230-170(147)265)367-385(311,312)330-58-115-94(32-137(349-115)253-70-216-146-160(253)225-173(197)229-169(146)264)365-381(303,304)322-50-107-88(26-131(341-107)246-39-77(5)167(262)236-185(246)276)358-375(291,292)324-52-109-89(27-132(343-109)248-65-211-141-150(192)201-60-206-155(141)248)360-378(297,298)317-44-101-81(19-124(335-101)239-13-8-118(188)221-178(239)269)352-370(281,282)315-42-99-80(18-123(333-99)238-12-7-117(187)220-177(238)268)351-368(277,278)313-41-98-78(257)16-121(332-98)247-64-210-140-149(191)200-59-205-154(140)247/h6-15,35-39,59-72,78-115,121-139,256-257H,16-34,40-58H2,1-5H3,(H,277,278)(H,279,280)(H,281,282)(H,283,284)(H,285,286)(H,287,288)(H,289,290)(H,291,292)(H,293,294)(H,295,296)(H,297,298)(H,299,300)(H,301,302)(H,303,304)(H,305,306)(H,307,308)(H,309,310)(H,311,312)(H2,186,219,267)(H2,187,220,268)(H2,188,221,269)(H2,189,222,270)(H2,190,223,271)(H2,191,200,205)(H2,192,201,206)(H2,193,202,207)(H2,194,203,208)(H2,195,204,209)(H,232,258,272)(H,233,259,273)(H,234,260,274)(H,235,261,275)(H,236,262,276)(H3,196,224,228,263)(H3,197,225,229,264)(H3,198,226,230,265)(H3,199,227,231,266)/t78-,79-,80-,81-,82-,83-,84-,85-,86-,87-,88-,89-,90-,91-,92-,93-,94-,95-,96-,97+,98+,99+,100+,101+,102+,103+,104+,105+,106+,107+,108+,109+,110+,111+,112+,113+,114+,115+,121+,122+,123+,124+,125+,126+,127+,128+,129+,130+,131+,132+,133+,134+,135+,136+,137+,138+,139+/m0/s1
InChIKeyBQIIVUMGIAZUPO-YFJDSVODSA-N
ChEBI Ontology
Outgoing Relation(s)
5'-CTGCAGAATTCTGGTACCA-3' (CHEBI:75829) is a single-stranded DNA oligonucleotide (CHEBI:75153)
Synonyms  Source
d(C-T-G-C-A-G-A-A-T-T-C-T-G-G-T-A-C-C-A)ChEBI
d(CTGCAGAATTCTGGTACCA)ChEBI
5'-d[CTGCAGAATTCTGGTACCA]-3'ChEBI
dsPRKChEBI
5'-CpTpGpCpApGpApApTpTpCpTpGpGpTpApCpCpA-3'ChEBI
Citations