EMBL-EBI | Chemical Biology | ChEBI

Example searches: iron*, InChI=1S/CH4O/c1-2/h2H,1H3, caffeine | Advanced Search

CHEBI:75702 - dU5

ChEBI IDCHEBI:75702
ChEBI NamedU5
Stars
ASCII NamedU5
DefinitionAn oligonucleotide comprised of five 2-deoxyuridine residues connected via 3'→5' phosphodiester linkages.
Last Modified18 October 2013
SubmitterMarcus Ennis
DownloadsMolfile
FormulaC45H56N10O33P4
Net Charge0
Average Mass1388.876
Monoisotopic Mass1388.19617
SMILESO=c1ccn([C@H]2C[C@H](OP(=O)(O)OC[C@H]3O[C@@H](n4ccc(=O)nc4=O)C[C@@H]3OP(=O)(O)OC[C@H]3O[C@@H](n4ccc(=O)nc4=O)C[C@@H]3OP(=O)(O)OC[C@H]3O[C@@H](n4ccc(=O)nc4=O)C[C@@H]3OP(=O)(O)OC[C@H]3O[C@@H](n4ccc(=O)nc4=O)C[C@@H]3O)[C@@H](CO)O2)c(=O)n1
InChIInChI=1S/C45H56N10O33P4/c56-16-26-22(12-37(80-26)52-7-2-32(59)47-42(52)64)85-90(70,71)77-18-28-24(14-39(82-28)54-9-4-34(61)49-44(54)66)87-92(74,75)79-20-30-25(15-40(84-30)55-10-5-35(62)50-45(55)67)88-91(72,73)78-19-29-23(13-38(83-29)53-8-3-33(60)48-43(53)65)86-89(68,69)76-17-27-21(57)11-36(81-27)51-6-1-31(58)46-41(51)63/h1-10,21-30,36-40,56-57H,11-20H2,(H,68,69)(H,70,71)(H,72,73)(H,74,75)(H,46,58,63)(H,47,59,64)(H,48,60,65)(H,49,61,66)(H,50,62,67)/t21-,22-,23-,24-,25-,26+,27+,28+,29+,30+,36+,37+,38+,39+,40+/m0/s1
InChIKeyGIFVPRBALAADGI-JEJWACCESA-N
ChEBI Ontology
Outgoing Relation(s)
dU5 (CHEBI:75702) has part dUMP residue (CHEBI:75714)
dU5 (CHEBI:75702) is a oligonucleotide (CHEBI:7754)
Synonyms  Source
DNA dU5ChEBI
single-stranded dU5ChEBI
5'-d(*up*up*up*up*u)-3'ChEBI
5'-d(UUUUU)-3'ChEBI
dT5ChEBI
5'-dU5-3'ChEBI
Citations