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CHEBI:70841 - β-D-Galp-(1→4)-α-D-GalpNAc-(1→3)-[α-L-Fucp-(1→2)]-β-D-Galp-(1→4)-β-D-GlcpNAc

ChEBI IDCHEBI:70841
ChEBI Nameβ-D-Galp-(1→4)-α-D-GalpNAc-(1→3)-[α-L-Fucp-(1→2)]-β-D-Galp-(1→4)-β-D-GlcpNAc
Stars
ASCII Namebeta-D-Galp-(1->4)-alpha-D-GalpNAc-(1->3)-[alpha-L-Fucp-(1->2)]-beta-D-Galp-(1->4)-beta-D-GlcpNAc
DefinitionA branched amino pentasaccharide comprised of a linear chain of β-D-galactose, N-acetyl-α-D-galactosamine, β-D-galactose and N-acetyl-β-D-glucosamine residues linked sequentially (1→4), (1→3) and (1→4), with an α-L-fucosyl residue linked (1→2) to the galactose residue proximal to the reducing-end N-acetylglucosamine residue.
Last Modified21 June 2024
SubmitterMarcus Ennis
DownloadsMolfile
FormulaC34H58N2O25
Net Charge0
Average Mass894.827
Monoisotopic Mass894.33287
SMILESCC(=O)N[C@@H]1[C@@H](O)[C@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O[C@H]3O[C@H](CO)[C@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O)[C@H]4O)[C@H](O)[C@H]3NC(C)=O)[C@H]2O[C@@H]2O[C@@H](C)[C@@H](O)[C@@H](O)[C@@H]2O)[C@@H](CO)O[C@H]1O
WURCSWURCS=2.0/4,5,4/[a2122h-1b_1-5_2*NCC/3=O][a2112h-1b_1-5][a1221m-1a_1-5][a2112h-1a_1-5_2*NCC/3=O]/1-2-3-4-2/a4-b1_b2-c1_b3-d1_d4-e1
InChIInChI=1S/C34H58N2O25/c1-8-17(43)22(48)24(50)32(53-8)61-29-28(19(45)12(5-38)56-34(29)59-26-13(6-39)54-30(52)15(20(26)46)35-9(2)41)60-31-16(36-10(3)42)21(47)27(14(7-40)57-31)58-33-25(51)23(49)18(44)11(4-37)55-33/h8,11-34,37-40,43-52H,4-7H2,1-3H3,(H,35,41)(H,36,42)/t8-,11+,12+,13+,14+,15+,16+,17+,18-,19-,20+,21+,22+,23-,24-,25+,26+,27-,28-,29+,30+,31+,32-,33-,34-/m0/s1
InChIKeyGABPUYHGBUJHRN-JXQLCXQFSA-N
Roles Classification
Biological Role:
epitope  The biological role played by a material entity when bound by a receptor of the adaptive immune system. Specific site on an antigen to which an antibody binds.
ChEBI Ontology
Outgoing Relation(s)
β-D-Galp-(1→4)-α-D-GalpNAc-(1→3)-[α-L-Fucp-(1→2)]-β-D-Galp-(1→4)-β-D-GlcpNAc (CHEBI:70841) has role epitope (CHEBI:53000)
β-D-Galp-(1→4)-α-D-GalpNAc-(1→3)-[α-L-Fucp-(1→2)]-β-D-Galp-(1→4)-β-D-GlcpNAc (CHEBI:70841) is a amino pentasaccharide (CHEBI:59268)
β-D-Galp-(1→4)-α-D-GalpNAc-(1→3)-[α-L-Fucp-(1→2)]-β-D-Galp-(1→4)-β-D-GlcpNAc (CHEBI:70841) is a glucosamine oligosaccharide (CHEBI:22485)
IUPAC Name 
α-L-fucopyranosyl-(1→2)-[β-D-galactopyranosyl-(1→4)-2-acetamido-2-deoxy-α-D-galactopyranosyl-(1→3)]-β-D-galactopyranosyl-(1→4)-2-acetamido-2-deoxy-β-D-glucopyranose
Synonyms  Source
6-deoxy-α-L-galactopyranosyl-(1→2)-[β-D-galactopyranosyl-(1→4)-2-acetamido-2-deoxy-α-D-galactopyranosyl-(1→3)]-β-D-galactopyranosyl-(1→4)-2-acetamido-2-deoxy-β-D-glucopyranoseIUPAC
α-L-fucosyl-(1→2)-[β-D-galactosyl-(1→4)-N-acetyl-α-D-galactosaminyl-(1→3)]-β-D-galactosyl-(1→4)-N-acetyl-β-D-glucosamineChEBI
β-D-Gal-(1→4)-α-D-GalNAc-(1→3)-[α-L-Fuc-(1→2)]-β-D-Gal-(1→4)-β-D-GlcNAcChEBI
α-L-Fuc-(1→2)-[β-D-Gal-(1→4)-α-D-GalNAc-(1→3)]-β-D-Gal-(1→4)-β-D-GlcNAcChEBI
α-L-Fucp-(1→2)-[β-D-Galp-(1→4)-α-D-GalpNAc-(1→3)]-β-D-Galp-(1→4)-β-D-GlcpNAcJCBN
Galβ1-4GalNAcα1-3(Fucα1-2)Galβ1-4GlcNAcβChEBI
Manual XrefsDatabases
G44738JRGlyTouCan
G44738JRGlyGen
Citations