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CHEBI:60393 - α-Kdo-(2→8)-[α-Kdo-(2→4)]-α-Kdo

ChEBI IDCHEBI:60393
ChEBI Nameα-Kdo-(2→8)-[α-Kdo-(2→4)]-α-Kdo
Stars
ASCII Namealpha-Kdo-(2->8)-[alpha-Kdo-(2->4)]-alpha-Kdo
DefinitionA trisaccharide consisting of three 3-deoxy-α-D-manno-oct-2-ulopyranonosyl units in a branched sequence.
Last Modified11 October 2010
SubmitterSteve
DownloadsMolfile
FormulaC24H38O22
Net Charge0
Average Mass678.546
Monoisotopic Mass678.18547
SMILES[H][C@]1([C@H](O)CO)O[C@@](OC[C@@H](O)[C@@]2([H])O[C@@](O)(C(=O)O)C[C@@H](O[C@]3(C(=O)O)C[C@@H](O)[C@@H](O)[C@@]([H])([C@H](O)CO)O3)[C@H]2O)(C(=O)O)C[C@@H](O)[C@H]1O
WURCSWURCS=2.0/1,3,2/[Aad1122h-2a_2-6]/1-1-1/a4-b2_a8-c2
InChIInChI=1S/C24H38O22/c25-4-9(29)16-13(32)7(27)1-23(45-16,20(37)38)42-6-11(31)18-15(34)12(3-22(41,44-18)19(35)36)43-24(21(39)40)2-8(28)14(33)17(46-24)10(30)5-26/h7-18,25-34,41H,1-6H2,(H,35,36)(H,37,38)(H,39,40)/t7-,8-,9-,10-,11-,12-,13-,14-,15-,16-,17-,18-,22-,23-,24-/m1/s1
InChIKeyODUXWSZMWJAAPV-VGCKMWDQSA-N
Roles Classification
Biological Role:
epitope  The biological role played by a material entity when bound by a receptor of the adaptive immune system. Specific site on an antigen to which an antibody binds.
ChEBI Ontology
Outgoing Relation(s)
α-Kdo-(2→8)-[α-Kdo-(2→4)]-α-Kdo (CHEBI:60393) has role epitope (CHEBI:53000)
α-Kdo-(2→8)-[α-Kdo-(2→4)]-α-Kdo (CHEBI:60393) is a trisaccharide (CHEBI:27150)
IUPAC Name 
3-deoxy-α-D-manno-oct-2-ulopyranonosyl-(2→4)-[3-deoxy-α-D-manno-oct-2-ulopyranonosyl-(2→8)]-3-deoxy-α-D-manno-oct-2-ulopyranosonic acid
Synonym  Source
Kdo(2→8)[Kdo(2→4)]KdoChEBI
Citations