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CHEBI:60383 - α-D-Kdo-(2→8)-[α-D-Kdo-(2→4)]-α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-β-D-GlcN-4P-(1→6)-α-D-GlcN-1P

ChEBI IDCHEBI:60383
ChEBI Nameα-D-Kdo-(2→8)-[α-D-Kdo-(2→4)]-α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-β-D-GlcN-4P-(1→6)-α-D-GlcN-1P
Stars
ASCII Namealpha-D-Kdo-(2->8)-[alpha-D-Kdo-(2->4)]-alpha-D-Kdo-(2->4)-alpha-D-Kdo-(2->6)-beta-D-GlcN-4P-(1->6)-alpha-D-GlcN-1P
DefinitionA six-membered oligosaccharide phosphate antigen consisting of four 3-deoxy-D-manno-oct-2-ulose residues and two glucosamine residues (one at the reducing end) in a branched sequence, with two phosphate groups attached.
Last Modified30 March 2011
SubmitterSteve
DownloadsMolfile
FormulaC44H74N2O43P2
Net Charge0
Average Mass1380.995
Monoisotopic Mass1380.31405
SMILES[H][C@]1([C@H](O)CO)O[C@@](OC[C@@H](O)[C@@]2([H])O[C@@](O[C@@H]3C[C@](OC[C@H]4O[C@@H](OC[C@H]5O[C@H](OP(=O)(O)O)[C@H](N)[C@@H](O)[C@@H]5O)[C@H](N)[C@@H](O)[C@@H]4OP(=O)(O)O)(C(=O)O)O[C@]([H])([C@H](O)CO)[C@@H]3O)(C(=O)O)C[C@@H](O[C@]3(C(=O)O)C[C@@H](O)[C@@H](O)[C@@]([H])([C@H](O)CO)O3)[C@H]2O)(C(=O)O)C[C@@H](O)[C@H]1O
InChIInChI=1S/C44H74N2O43P2/c45-21-28(61)25(58)19(80-36(21)89-91(74,75)76)9-77-35-22(46)29(62)34(88-90(71,72)73)20(81-35)10-79-42(38(65)66)3-17(26(59)32(85-42)15(54)7-49)83-44(40(69)70)4-18(82-43(39(67)68)2-12(51)24(57)31(86-43)14(53)6-48)27(60)33(87-44)16(55)8-78-41(37(63)64)1-11(50)23(56)30(84-41)13(52)5-47/h11-36,47-62H,1-10,45-46H2,(H,63,64)(H,65,66)(H,67,68)(H,69,70)(H2,71,72,73)(H2,74,75,76)/t11-,12-,13-,14-,15-,16-,17-,18-,19-,20-,21-,22-,23-,24-,25-,26-,27-,28-,29-,30-,31-,32-,33-,34-,35-,36-,41-,42-,43-,44-/m1/s1
InChIKeyJTLSYBUGJYOKCZ-JONMGTORSA-N
Roles Classification
Biological Role:
epitope  The biological role played by a material entity when bound by a receptor of the adaptive immune system. Specific site on an antigen to which an antibody binds.
ChEBI Ontology
Outgoing Relation(s)
α-D-Kdo-(2→8)-[α-D-Kdo-(2→4)]-α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-β-D-GlcN-4P-(1→6)-α-D-GlcN-1P (CHEBI:60383) has role epitope (CHEBI:53000)
α-D-Kdo-(2→8)-[α-D-Kdo-(2→4)]-α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-β-D-GlcN-4P-(1→6)-α-D-GlcN-1P (CHEBI:60383) is a glucosamine oligosaccharide (CHEBI:22485)
α-D-Kdo-(2→8)-[α-D-Kdo-(2→4)]-α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-β-D-GlcN-4P-(1→6)-α-D-GlcN-1P (CHEBI:60383) is a oligosaccharide phosphate (CHEBI:16916)
IUPAC Name 
3-deoxy-α-D-manno-oct-2-ulopyranonosyl-(2→4)-[3-deoxy-α-D-manno-oct-2-ulopyranonosyl-(2→8)]-3-deoxy-α-D-manno-oct-2-ulopyranonosyl-(2→4)-3-deoxy-α-D-manno-oct-2-ulopyranonosyl-(2→6)-2-acetamido-2-deoxy-4-O-phosphono-β-D-glucopyranosyl-(1→6)-2-acetamido-2-deoxy-1-O-phosphono-α-D-glucopyranose
Synonyms  Source
Kdo(2→8)[Kdo(2→4)]Kdo(2→4)Kdo(2→6)GlcN4P(1→6)GlcN1PChEBI
(GlcN)2 (Kdo)4 (P)2KEGG GLYCAN
Manual XrefsDatabases
G05419KEGG GLYCAN
Citations