alpha-L-Rhap-(1->3)-alpha-D-Galp-(1->2)-[alpha-D-Abep-(1->3)]-alpha-D-Manp-(1->4)-alpha-L-Rhap (CHEBI:59407)

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CHEBI:59407 - α-L-Rhap-(1→3)-α-D-Galp-(1→2)-[α-D-Abep-(1→3)]-α-D-Manp-(1→4)-α-L-Rhap

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ChEBI ID	CHEBI:59407
ChEBI Name	α-L-Rhap-(1→3)-α-D-Galp-(1→2)-[α-D-Abep-(1→3)]-α-D-Manp-(1→4)-α-L-Rhap
Stars
ASCII Name	alpha-L-Rhap-(1->3)-alpha-D-Galp-(1->2)-[alpha-D-Abep-(1->3)]-alpha-D-Manp-(1->4)-alpha-L-Rhap
Definition	A branched pentasaccharide consisting of α-L-rhamnose, α-D-galactose, α-D-mannose and α-L-rhamnose residues linked sequentially (1→3), (1→2) and (1→4), to the the mannose residue of which is also linked (1→3) an α-D-abequose residue; epitope of the O-antigen polysaccharide in Salmonella.
Last Modified	28 September 2016
Submitter	zjosephs
Downloads	Molfile

Formula	C30H52O22
Net Charge	0
Average Mass	764.724
Monoisotopic Mass	764.29502
SMILES	C[C@@H]1O[C@@H](O[C@H]2[C@@H](O)[C@@H](CO)O[C@H](O[C@@H]3[C@@H](O[C@@H]4[C@@H](O)[C@@H](O)[C@H](O)O[C@H]4C)O[C@H](CO)[C@@H](O)[C@@H]3O[C@H]3O[C@H](C)[C@H](O)C[C@H]3O)[C@@H]2O)[C@H](O)[C@H](O)[C@H]1O
WURCS	WURCS=2.0/4,5,4/[a2211m-1a_1-5][a1122h-1a_1-5][a2112h-1a_1-5][a2d12m-1a_1-5]/1-2-3-1-4/a4-b1_b2-c1_b3-e1_c3-d1
InChI	InChI=1S/C30H52O22/c1-7-10(33)4-11(34)27(45-7)51-24-16(37)13(6-32)48-30(49-22-9(3)44-26(43)19(40)18(22)39)25(24)52-29-21(42)23(15(36)12(5-31)47-29)50-28-20(41)17(38)14(35)8(2)46-28/h7-43H,4-6H2,1-3H3/t7-,8+,9+,10-,11-,12-,13-,14+,15+,16-,17-,18+,19-,20-,21-,22+,23+,24+,25+,26-,27-,28+,29-,30-/m1/s1
InChIKey	NYMMEMNZIHSXEZ-BLAKMWPASA-N

Roles Classification

Biological Role:

epitope The biological role played by a material entity when bound by a receptor of the adaptive immune system. Specific site on an antigen to which an antibody binds.

ChEBI Ontology

Outgoing Relation(s)
	α-L-Rhap-(1→3)-α-D-Galp-(1→2)-[α-D-Abep-(1→3)]-α-D-Manp-(1→4)-α-L-Rhap (CHEBI:59407) has role epitope (CHEBI:53000)
	α-L-Rhap-(1→3)-α-D-Galp-(1→2)-[α-D-Abep-(1→3)]-α-D-Manp-(1→4)-α-L-Rhap (CHEBI:59407) is a pentasaccharide (CHEBI:35369)

IUPAC Name
6-deoxy-α-L-mannopyranosyl-(1→3)-α-D-galactopyranosyl-(1→2)-[3,6-dideoxy-α-D-xylo-hexopyranosyl-(1→3)]-α-D-mannopyranosyl-(1→4)-6-deoxy-α-L-mannopyranose

Synonyms	Source
α-L-rhamnopyranosyl-(1→3)-α-D-galactopyranosyl-(1→2)-[α-D-abequopyranosyl-(1→3)]-α-D-mannopyranosyl-(1→4)-α-L-rhamnopyranose	ChEBI
α-L-Rha-(1→3)-α-D-Gal-(1→2)-[α-D-Abe-(1→3)]-α-D-Man-(1→4)-α-L-Rha	ChEBI
RG(A)MR	ChEBI
Rhaα1-3Galα1-2(Abeα1-3)Manα1-4Rhaα	ChEBI
α-L-rhamnosyl-(1→3)-α-D-galactosyl-(1→2)-[α-D-abequosyl-(1→3)]-α-D-mannosyl-(1→4)-α-L-rhamnose	ChEBI

Citations