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CHEBI:59300 - α-D-Kdo-(2→8)-α-D-Kdo-(2→6)-β-D-GlcNAc

ChEBI IDCHEBI:59300
ChEBI Nameα-D-Kdo-(2→8)-α-D-Kdo-(2→6)-β-D-GlcNAc
Stars
ASCII Namealpha-D-Kdo-(2->8)-alpha-D-Kdo-(2->6)-beta-D-GlcNAc
DefinitionA trisaccharide consisting of two 3-deoxy-D-manno-oct-2-ulose residues and a single N-acetylglucosamine residue in a linear sequence, joined via α-linkages.
Last Modified20 May 2020
SubmitterSteve
DownloadsMolfile
FormulaC24H39NO20
Net Charge0
Average Mass661.563
Monoisotopic Mass661.20654
SMILES[H][C@]1([C@H](O)CO)O[C@@](OC[C@@H](O)[C@@]2([H])O[C@@](OC[C@H]3O[C@@H](O)[C@H](NC(C)=O)[C@@H](O)[C@@H]3O)(C(=O)O)C[C@@H](O)[C@H]2O)(C(=O)O)C[C@@H](O)[C@H]1O
InChIInChI=1S/C24H39NO20/c1-7(27)25-13-17(35)16(34)12(43-20(13)36)6-42-24(22(39)40)3-9(29)15(33)19(45-24)11(31)5-41-23(21(37)38)2-8(28)14(32)18(44-23)10(30)4-26/h8-20,26,28-36H,2-6H2,1H3,(H,25,27)(H,37,38)(H,39,40)/t8-,9-,10-,11-,12-,13-,14-,15-,16-,17-,18-,19-,20-,23-,24-/m1/s1
InChIKeyCIECPUURYJLGLP-BFXSNYIPSA-N
Roles Classification
Biological Role:
epitope  The biological role played by a material entity when bound by a receptor of the adaptive immune system. Specific site on an antigen to which an antibody binds.
ChEBI Ontology
Outgoing Relation(s)
α-D-Kdo-(2→8)-α-D-Kdo-(2→6)-β-D-GlcNAc (CHEBI:59300) has role epitope (CHEBI:53000)
α-D-Kdo-(2→8)-α-D-Kdo-(2→6)-β-D-GlcNAc (CHEBI:59300) is a amino trisaccharide (CHEBI:59266)
α-D-Kdo-(2→8)-α-D-Kdo-(2→6)-β-D-GlcNAc (CHEBI:59300) is a glucosamine oligosaccharide (CHEBI:22485)
IUPAC Name 
3-deoxy-α-D-manno-oct-2-ulopyranonosyl-(2→8)-3-deoxy-α-D-manno-oct-2-ulopyranonosyl-(2→6)-2-acetamido-2-deoxy-β-D-glucopyranose
Synonyms  Source
Kdoα2-8Kdoα2-6GlcNAcβChEBI
α-D-Kdop-(2→8)-α-D-Kdop-(2→6)-β-D-GlcpNAcIUPAC
Citations