EMBL-EBI | Chemical Biology | ChEBI

Example searches: iron*, InChI=1S/CH4O/c1-2/h2H,1H3, caffeine | Advanced Search

CHEBI:57964 - GDP-4-dehydro-6-deoxy-α-D-mannose(2−)

ChEBI IDCHEBI:57964
ChEBI NameGDP-4-dehydro-6-deoxy-α-D-mannose(2−)
Stars
ASCII NameGDP-4-dehydro-6-deoxy-alpha-D-mannose(2-)
DefinitionDianion of GDP-4-dehydro-6-deoxy-α-D-mannose arising from deprotonation of the phosphate OH groups; major species at pH 7.3.
Last Modified20 November 2019
DownloadsMolfile
FormulaC16H21N5O15P2
Net Charge-2
Average Mass585.312
Monoisotopic Mass585.05204
SMILESC[C@H]1O[C@H](OP(=O)([O-])OP(=O)([O-])OC[C@H]2O[C@@H](n3cnc4c(=O)nc(N)nc43)[C@H](O)[C@@H]2O)[C@@H](O)[C@@H](O)C1=O
InChIInChI=1S/C16H23N5O15P2/c1-4-7(22)9(24)11(26)15(33-4)35-38(30,31)36-37(28,29)32-2-5-8(23)10(25)14(34-5)21-3-18-6-12(21)19-16(17)20-13(6)27/h3-5,8-11,14-15,23-26H,2H2,1H3,(H,28,29)(H,30,31)(H3,17,19,20,27)/p-2/t4-,5-,8-,9+,10-,11+,14-,15-/m1/s1
InChIKeyPNHLMHWWFOPQLK-BKUUWRAGSA-L
Species of MetaboliteComponentSourceComments
Homo sapiens (ncbitaxon:9606) - DOI (10.1038/nbt.2488)
Roles Classification
Biological Role:
human metabolite  Any mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens).
ChEBI Ontology
Outgoing Relation(s)
GDP-4-dehydro-6-deoxy-α-D-mannose(2−) (CHEBI:57964) has role human metabolite (CHEBI:77746)
GDP-4-dehydro-6-deoxy-α-D-mannose(2−) (CHEBI:57964) is a nucleotide-sugar oxoanion (CHEBI:59737)
GDP-4-dehydro-6-deoxy-α-D-mannose(2−) (CHEBI:57964) is conjugate base of GDP-4-dehydro-6-deoxy-α-D-mannose (CHEBI:16955)
Incoming Relation(s)
GDP-4-dehydro-6-deoxy-α-D-mannose (CHEBI:16955) is conjugate acid of GDP-4-dehydro-6-deoxy-α-D-mannose(2−) (CHEBI:57964)
IUPAC Name 
guanosine 5'-[3-(6-deoxy-α-D-lyxo-hexopyranosyl-4-ulose) diphosphate]
Synonym  Source
GDP-4-dehydro-6-deoxy-α-D-mannose dianionChEBI
UniProt Name  Source
GDP-4-dehydro-α-D-rhamnoseUniProt
Manual XrefsDatabases
GDP-4-DEHYDRO-6-DEOXY-D-MANNOSEMetaCyc