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CHEBI:52955 - Alexa Fluor 610-X(2−)

ChEBI IDCHEBI:52955
ChEBI NameAlexa Fluor 610-X(2−)
Stars
ASCII NameAlexa Fluor 610-X(2-)
DefinitionA cationic fluorescent dye derived from a heteropentacyclic ring system.
Last Modified10 August 2009
SubmitterSteve
DownloadsMolfile
FormulaC46H45Cl3N4O14S3
Net Charge-2
Average Mass1080.440
Monoisotopic Mass1078.11710
SMILESCN1c2cc3c(cc2C(CS(=O)(=O)[O-])=CC1(C)C)C(c1c(Cl)c(SCC(=O)NCCCCCC(=O)ON2C(=O)CCC2=O)c(Cl)c(Cl)c1C(=O)[O-])=c1cc2c(cc1O3)=[N+](C)C(C)(C)C=C2CS(=O)(=O)[O-]
InChIInChI=1S/C46H47Cl3N4O14S3/c1-45(2)18-23(21-69(60,61)62)25-14-27-31(16-29(25)51(45)5)66-32-17-30-26(24(22-70(63,64)65)19-46(3,4)52(30)6)15-28(32)37(27)38-39(44(58)59)40(47)42(49)43(41(38)48)68-20-33(54)50-13-9-7-8-10-36(57)67-53-34(55)11-12-35(53)56/h14-19H,7-13,20-22H2,1-6H3,(H3-,50,54,58,59,60,61,62,63,64,65)/p-2
InChIKeyGGUZJJWHMIUOBS-UHFFFAOYSA-L
Roles Classification
Application:
fluorochrome  A fluorescent dye used to stain biological specimens.
ChEBI Ontology
Outgoing Relation(s)
Alexa Fluor 610-X(2−) (CHEBI:52955) has role fluorochrome (CHEBI:51217)
Alexa Fluor 610-X(2−) (CHEBI:52955) is a organic heteropentacyclic compound (CHEBI:38164)
Alexa Fluor 610-X(2−) (CHEBI:52955) is a organosulfonate oxoanion (CHEBI:33554)
Incoming Relation(s)
Alexa Fluor 610-X (CHEBI:52677) has part Alexa Fluor 610-X(2−) (CHEBI:52955)
IUPAC Name 
2,3,5-trichloro-4-{[2-({6-[(2,5-dioxopyrrolidin-1-yl)oxy]-6-oxohexyl}amino)-2-oxoethyl]sulfanyl}-6-[1,2,2,10,10,11-hexamethyl-4,8-bis(sulfonatomethyl)-10,11-dihydro-2H-pyrano[3,2-g:5,6-g']diquinolin-1-ium-6-yl]benzoate
Synonyms  Source
Alexa Fluor 610-X dicationChEBI
Alexa Fluor 610-X cationChEBI