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CHEBI:52336 - tetramethylrhodamine thiocyanate

ChEBI IDCHEBI:52336
ChEBI Nametetramethylrhodamine thiocyanate
Stars
Last Modified6 August 2009
SubmitterInma Spiteri
DownloadsMolfile
FormulaC25H22N3O3S.Cl
Net Charge0
Average Mass479.989
Monoisotopic Mass479.10704
SMILESCN(C)c1ccc2c(-c3ccc(SC#N)cc3C(=O)O)c3ccc(N(C)C)cc3[o+]c2c1.[Cl-]
InChIInChI=1S/C25H21N3O3S.ClH/c1-27(2)15-5-8-19-22(11-15)31-23-12-16(28(3)4)6-9-20(23)24(19)18-10-7-17(32-14-26)13-21(18)25(29)30;/h5-13H,1-4H3;1H
InChIKeyJGVWCANSWKRBCS-UHFFFAOYSA-N
Roles Classification
Application:
fluorochrome  A fluorescent dye used to stain biological specimens.
ChEBI Ontology
Outgoing Relation(s)
tetramethylrhodamine thiocyanate (CHEBI:52336) has functional parent rhodamine 110 (CHEBI:52315)
tetramethylrhodamine thiocyanate (CHEBI:52336) has part tetramethylrhodamine thiocyanate cation (CHEBI:52933)
tetramethylrhodamine thiocyanate (CHEBI:52336) has role fluorochrome (CHEBI:51217)
tetramethylrhodamine thiocyanate (CHEBI:52336) is a organic chloride salt (CHEBI:36094)
IUPAC Name 
9-(2-carboxy-4-thiocyanatophenyl)-3,6-bis(dimethylamino)xanthenium chloride
Synonyms  Source
Rhodamine tetramethylisothiocyanateChemIDplus
TRITCChemIDplus
Registry NumbersSources
CAS:4158-89-8ChemIDplus