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CHEBI:51746 - Alexa Fluor 405

ChEBI IDCHEBI:51746
ChEBI NameAlexa Fluor 405
Stars
DefinitionA fluorescent dye of absorption wavelength 401 nm and emission wavelength 421 nm derived from tris(triethylammonium)-8-hydroxypyrene-1,3,6-trisulfonate.
Last Modified28 November 2011
SubmitterInma Spiteri
DownloadsMolfile
FormulaC28H21N2O15S3.3C6H16N
Net Charge0
Average Mass1028.279
Monoisotopic Mass1027.39523
SMILESCC[NH+](CC)CC.CC[NH+](CC)CC.CC[NH+](CC)CC.O=C(ON1C(=O)CCC1=O)C1CCN(C(=O)COc2cc(S(=O)(=O)[O-])c3ccc4c(S(=O)(=O)[O-])cc(S(=O)(=O)[O-])c5ccc2c3c54)CC1
InChIInChI=1S/C28H24N2O15S3.3C6H15N/c31-23-5-6-24(32)30(23)45-28(34)14-7-9-29(10-8-14)25(33)13-44-19-11-20(46(35,36)37)16-3-4-18-22(48(41,42)43)12-21(47(38,39)40)17-2-1-15(19)26(16)27(17)18;3*1-4-7(5-2)6-3/h1-4,11-12,14H,5-10,13H2,(H,35,36,37)(H,38,39,40)(H,41,42,43);3*4-6H2,1-3H3
InChIKeyJLDSMZIBHYTPPR-UHFFFAOYSA-N
Roles Classification
Application:
fluorochrome  A fluorescent dye used to stain biological specimens.
ChEBI Ontology
Outgoing Relation(s)
Alexa Fluor 405 (CHEBI:51746) has parent hydride pyrene (CHEBI:39106)
Alexa Fluor 405 (CHEBI:51746) has part Alexa Fluor 405(3−) (CHEBI:63290)
Alexa Fluor 405 (CHEBI:51746) has part triethylammonium ion (CHEBI:45791)
Alexa Fluor 405 (CHEBI:51746) has role fluorochrome (CHEBI:51217)
Alexa Fluor 405 (CHEBI:51746) is a organoammonium salt (CHEBI:46850)
IUPAC Name 
tris(N,N-diethylethanaminium) 8-[2-(4-{[(2,5-dioxopyrrolidin-1-yl)oxy]carbonyl}piperidin-1-yl)-2-oxoethoxy]pyrene-1,3,6-trisulfonate
Synonym  Source
Alexa Fluor 405 carboxylic acid, succinimidyl esterChEBI