CHEBI:17748 - thymidine

ChEBI IDCHEBI:17748
ChEBI Namethymidine
Stars
DefinitionA pyrimidine 2'-deoxyribonucleoside having thymine as the nucleobase.
Secondary ChEBI IDsCHEBI:9579, CHEBI:15244, CHEBI:19273, CHEBI:45782, CHEBI:45834, CHEBI:45917, CHEBI:45918
Last Modified23 January 2025
DownloadsMolfile
FormulaC10H14N2O5
Net Charge0
Average Mass242.231
Monoisotopic Mass242.09027
SMILESCc1cn([C@H]2C[C@H](O)[C@@H](CO)O2)c(=O)nc1=O
InChIInChI=1S/C10H14N2O5/c1-5-3-12(10(16)11-9(5)15)8-2-6(14)7(4-13)17-8/h3,6-8,13-14H,2,4H2,1H3,(H,11,15,16)/t6-,7+,8+/m0/s1
InChIKeyIQFYYKKMVGJFEH-XLPZGREQSA-N
Wikipedia
Species of MetaboliteComponentSourceComments
Homo sapiens (ncbitaxon:9606) - DOI (10.1038/nbt.2488)
Escherichia coli (ncbitaxon:562) - PubMed (21988831)
Mus musculus (ncbitaxon:10090) - PubMed (19425150) Source: BioModels - MODEL1507180067
Roles Classification
Biological Roles:
mouse metabolite  Any mammalian metabolite produced during a metabolic reaction in a mouse (Mus musculus).
Escherichia coli metabolite  Any bacterial metabolite produced during a metabolic reaction in Escherichia coli.
human metabolite  Any mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens).
metabolite  Any intermediate or product resulting from metabolism. The term 'metabolite' subsumes the classes commonly known as primary and secondary metabolites.
ChEBI Ontology
Outgoing Relation(s)
thymidine (CHEBI:17748) has functional parent thymine (CHEBI:17821)
thymidine (CHEBI:17748) has role Escherichia coli metabolite (CHEBI:76971)
thymidine (CHEBI:17748) has role human metabolite (CHEBI:77746)
thymidine (CHEBI:17748) has role metabolite (CHEBI:25212)
thymidine (CHEBI:17748) has role mouse metabolite (CHEBI:75771)
thymidine (CHEBI:17748) is a pyrimidine 2'-deoxyribonucleoside (CHEBI:19255)
thymidine (CHEBI:17748) is enantiomer of telbivudine (CHEBI:63624)
Incoming Relation(s)
5,6-dihydrothymidine (CHEBI:132171) has functional parent thymidine (CHEBI:17748)
5'-O-{[3-(benzoyloxy)-3-oxopropyl]carbamoyl}thymidine (CHEBI:71524) has functional parent thymidine (CHEBI:17748)
polyoxin (CHEBI:26194) has functional parent thymidine (CHEBI:17748)
thymidine phosphate (CHEBI:27001) has functional parent thymidine (CHEBI:17748)
tritiated thymidine (CHEBI:53526) has functional parent thymidine (CHEBI:17748)
α-tritiated thymidine (CHEBI:53527) has functional parent thymidine (CHEBI:17748)
telbivudine (CHEBI:63624) is enantiomer of thymidine (CHEBI:17748)
IUPAC Name 
thymidine
Synonyms  Source
ThymidineKEGG COMPOUND
DeoxythymidineKEGG COMPOUND
2'-thymidineChEBI
thymine 2'-deoxyribosideChEBI
1-(2-deoxy-β-D-erythro-pentofuranosyl)-5-methylpyrimidine-2,4(1H,3H)-dioneChEBI
dThdIUBMB
UniProt Name  Source
thymidineUniProt
Manual XrefsDatabases
C00214KEGG COMPOUND
THMPDBeChem
ThymidineWikipedia
DB04485DrugBank
THYMIDINEMetaCyc
HMDB0000273HMDB
C00019698KNApSAcK
Registry NumbersSources
Gmelin:282610Gmelin
Reaxys:89285Reaxys
CAS:50-89-5KEGG COMPOUND
CAS:50-89-5ChemIDplus
Citations