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CHEBI:17748 - thymidine

Default Structure
ChEBI IDCHEBI:17748
ChEBI Namethymidine
Stars
DefinitionA pyrimidine 2'-deoxyribonucleoside having thymine as the nucleobase.
Secondary ChEBI IDsCHEBI:9579, CHEBI:15244, CHEBI:19273, CHEBI:45782, CHEBI:45834, CHEBI:45917, CHEBI:45918
Last Modified23 January 2025
DownloadsMolfile
FormulaC10H14N2O5
Net Charge0
Average Mass242.231
Monoisotopic Mass242.09027
SMILESCc1cn([C@H]2C[C@H](O)[C@@H](CO)O2)c(=O)nc1=O
InChIInChI=1S/C10H14N2O5/c1-5-3-12(10(16)11-9(5)15)8-2-6(14)7(4-13)17-8/h3,6-8,13-14H,2,4H2,1H3,(H,11,15,16)/t6-,7+,8+/m0/s1
InChIKeyIQFYYKKMVGJFEH-XLPZGREQSA-N
Wikipedia
Species of MetaboliteComponentSourceComments
Escherichia coli (ncbitaxon:562) - PubMed (21988831)
Homo sapiens (ncbitaxon:9606) - DOI (10.1038/nbt.2488)
Mus musculus (ncbitaxon:10090) - PubMed (19425150) Source: BioModels - MODEL1507180067
Roles Classification
Biological Roles:
human metabolite  Any mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens).
metabolite  Any intermediate or product resulting from metabolism. The term 'metabolite' subsumes the classes commonly known as primary and secondary metabolites.
mouse metabolite  Any mammalian metabolite produced during a metabolic reaction in a mouse (Mus musculus).
Escherichia coli metabolite  Any bacterial metabolite produced during a metabolic reaction in Escherichia coli.
Application:
antineoplastic agent  A substance that inhibits or prevents the proliferation of neoplasms.
ChEBI Ontology
Outgoing Relation(s)
thymidine (CHEBI:17748) has functional parent thymine (CHEBI:17821)
thymidine (CHEBI:17748) has role Escherichia coli metabolite (CHEBI:76971)
thymidine (CHEBI:17748) has role antineoplastic agent (CHEBI:35610)
thymidine (CHEBI:17748) has role human metabolite (CHEBI:77746)
thymidine (CHEBI:17748) has role metabolite (CHEBI:25212)
thymidine (CHEBI:17748) has role mouse metabolite (CHEBI:75771)
thymidine (CHEBI:17748) is a pyrimidine 2'-deoxyribonucleoside (CHEBI:19255)
thymidine (CHEBI:17748) is enantiomer of telbivudine (CHEBI:63624)
Incoming Relation(s)
5,6-dihydrothymidine (CHEBI:132171) has functional parent thymidine (CHEBI:17748)
5'-O-{[3-(benzoyloxy)-3-oxopropyl]carbamoyl}thymidine (CHEBI:71524) has functional parent thymidine (CHEBI:17748)
polyoxin (CHEBI:26194) has functional parent thymidine (CHEBI:17748)
thymidine phosphate (CHEBI:27001) has functional parent thymidine (CHEBI:17748)
tritiated thymidine (CHEBI:53526) has functional parent thymidine (CHEBI:17748)
α-tritiated thymidine (CHEBI:53527) has functional parent thymidine (CHEBI:17748)
telbivudine (CHEBI:63624) is enantiomer of thymidine (CHEBI:17748)
IUPAC Name 
thymidine
INN  Source
doxribtimineWHO MedNet
Synonyms  Source
1-(2-deoxy-β-D-erythro-pentofuranosyl)-5-methylpyrimidine-2,4(1H,3H)-dioneChEBI
2'-deoxy-5-methyluridineChemIDplus
2'deoxythymidineChEMBL
2'-deoxythymidineChemIDplus
2'-thymidineChEBI
5-methyl-2'-deoxyuridineChemIDplus
Brand Name  Source
Doxribtimine component of mt-1621 2'-deoxythymidineChEMBL
UniProt Name  Source
thymidineUniProt
Manual XrefsDatabases
C00019698KNApSAcK
C00214KEGG COMPOUND
DB04485DrugBank
HMDB0000273HMDB
THMPDBeChem
ThymidineWikipedia
THYMIDINEMetaCyc
Registry NumbersSources
Gmelin:282610Gmelin
Reaxys:89285Reaxys
CAS:50-89-5KEGG COMPOUND
CAS:50-89-5ChemIDplus
Citations