CHEBI:44504 - nogalamycin

ChEBI IDCHEBI:44504
ChEBI Namenogalamycin
Stars
DefinitionAn anthracycline antibiotic isolated from Streptomyces nogalater. It is a DNA intercalator and exhibits anticancer properties.
Last Modified23 November 2020
DownloadsMolfile
FormulaC39H49NO16
Net Charge0
Average Mass787.812
Monoisotopic Mass787.30513
SMILES[H][C@@]12Oc3c(cc(O)c4c3C(=O)c3cc5c(c(O)c3C4=O)[C@@H](O[C@@H]3O[C@@H](C)[C@H](OC)[C@@](C)(OC)[C@H]3OC)C[C@](C)(O)[C@@H]5C(=O)OC)[C@@](C)(O1)[C@H](O)[C@@H](N(C)C)[C@@H]2O
InChIInChI=1S/C39H49NO16/c1-14-32(49-7)39(4,52-10)33(50-8)36(53-14)54-19-13-37(2,48)24(34(47)51-9)15-11-16-21(27(43)20(15)19)28(44)22-18(41)12-17-30(23(22)26(16)42)55-35-29(45)25(40(5)6)31(46)38(17,3)56-35/h11-12,14,19,24-25,29,31-33,35-36,41,43,45-46,48H,13H2,1-10H3/t14-,19-,24-,25-,29-,31+,32-,33-,35+,36-,37-,38+,39+/m0/s1
InChIKeyKGTDRFCXGRULNK-JYOBTZKQSA-N
Wikipedia
Species of MetaboliteComponentSourceComments
Streptomyces nogalater (ncbitaxon:38314) - PubMed (22073550) Strain: Lv65
Roles Classification
Chemical Role:
Bronsted base  A molecular entity capable of accepting a hydron from a donor (Brønsted acid).
Biological Roles:
bacterial metabolite  Any prokaryotic metabolite produced during a metabolic reaction in bacteria.
intercalator  A role played by a chemical agent which exhibits the capability of occupying space between DNA base pairs due to particular properties in size, shape and charge. Intercalation of chemical compounds in DNA helix can result in replication errors (shift, mutation) or DNA damages.
cardiotoxic agent  A role played by a chemical compound exhibiting itself through the ability to induce damage to the heart and cardiomyocytes.
antimicrobial agent  A substance that kills or slows the growth of microorganisms, including bacteria, viruses, fungi and protozoans.
metabolite  Any intermediate or product resulting from metabolism. The term 'metabolite' subsumes the classes commonly known as primary and secondary metabolites.
metabolite  Any intermediate or product resulting from metabolism. The term 'metabolite' subsumes the classes commonly known as primary and secondary metabolites.
Application:
antineoplastic agent  A substance that inhibits or prevents the proliferation of neoplasms.
ChEBI Ontology
Outgoing Relation(s)
nogalamycin (CHEBI:44504) has role antineoplastic agent (CHEBI:35610)
nogalamycin (CHEBI:44504) has role bacterial metabolite (CHEBI:76969)
nogalamycin (CHEBI:44504) has role cardiotoxic agent (CHEBI:50912)
nogalamycin (CHEBI:44504) has role intercalator (CHEBI:24853)
nogalamycin (CHEBI:44504) is a anthracycline antibiotic (CHEBI:49322)
nogalamycin (CHEBI:44504) is a methyl ester (CHEBI:25248)
nogalamycin (CHEBI:44504) is a monosaccharide derivative (CHEBI:63367)
nogalamycin (CHEBI:44504) is a organic heterohexacyclic compound (CHEBI:51914)
nogalamycin (CHEBI:44504) is a polyketide (CHEBI:26188)
nogalamycin (CHEBI:44504) is a tertiary amino compound (CHEBI:50996)
nogalamycin (CHEBI:44504) is a tetrol (CHEBI:33573)
IUPAC Name 
methyl (2R,3S,4R,5R,6R,11S,13S,14R)-11-[(6-deoxy-3-C-methyl-2,3,4-tri-O-methyl-α-L-mannopyranosyl)oxy]-4-(dimethylamino)-3,5,8,10,13-pentahydroxy-6,13-dimethyl-9,16-dioxo-3,4,5,6,9,11,12,13,14,16-decahydro-2H-2,6-epoxytetraceno[1,2-b]oxocine-14-carboxylate
INNs  Source
nogalamycinWHO MedNet
nogalamycineWHO MedNet
nogalamycinumWHO MedNet
nogalamicinaWHO MedNet
Synonyms  Source
U 15167ChemIDplus
U-15167ChemIDplus
antibiotic 205t3ChemIDplus
Manual XrefsDatabases
NGMPDBeChem
D05198KEGG DRUG
C18633KEGG COMPOUND
CPD-15795MetaCyc
NogalamycinWikipedia
4451071ChemSpider
Registry NumbersSources
CAS:1404-15-5ChemIDplus
CAS:1404-15-5KEGG COMPOUND
Citations