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CHEBI:28862 - dGDP

ChEBI IDCHEBI:28862
ChEBI NamedGDP
Stars
DefinitionA purine 2'-deoxyribonucleoside 5'-diphosphate having guanine as the nucleobase.
Secondary ChEBI IDsCHEBI:10495, CHEBI:19245, CHEBI:41949
Last Modified27 January 2016
DownloadsMolfile
FormulaC10H15N5O10P2
Net Charge0
Average Mass427.203
Monoisotopic Mass427.02941
SMILESNc1nc(=O)c2ncn([C@H]3C[C@H](O)[C@@H](COP(=O)(O)OP(=O)(O)O)O3)c2n1
InChIInChI=1S/C10H15N5O10P2/c11-10-13-8-7(9(17)14-10)12-3-15(8)6-1-4(16)5(24-6)2-23-27(21,22)25-26(18,19)20/h3-6,16H,1-2H2,(H,21,22)(H2,18,19,20)(H3,11,13,14,17)/t4-,5+,6+/m0/s1
InChIKeyCIKGWCTVFSRMJU-KVQBGUIXSA-N
Wikipedia
Species of MetaboliteComponentSourceComments
Escherichia coli (ncbitaxon:562) - PubMed (21988831)
Mus musculus (ncbitaxon:10090) - PubMed (19425150) Source: BioModels - MODEL1507180067
Roles Classification
Biological Roles:
fundamental metabolite  Any metabolite produced by all living cells.
mouse metabolite  Any mammalian metabolite produced during a metabolic reaction in a mouse (Mus musculus).
ChEBI Ontology
Outgoing Relation(s)
dGDP (CHEBI:28862) has role fundamental metabolite (CHEBI:78675)
dGDP (CHEBI:28862) is a deoxyguanosine phosphate (CHEBI:23625)
dGDP (CHEBI:28862) is a guanyl deoxyribonucleotide (CHEBI:63573)
dGDP (CHEBI:28862) is a purine 2'-deoxyribonucleoside 5'-diphosphate (CHEBI:37036)
dGDP (CHEBI:28862) is conjugate acid of dGDP(3−) (CHEBI:58595)
Incoming Relation(s)
dGDP(3−) (CHEBI:58595) is conjugate base of dGDP (CHEBI:28862)
IUPAC Name 
2'-deoxyguanosine 5'-(trihydrogen diphosphate)
Synonyms  Source
dGDPKEGG COMPOUND
2'-Deoxyguanosine 5'-diphosphateKEGG COMPOUND
2'-deoxyguanosine 5'-diphosphateChEBI
deoxyguanosine diphosphateChEBI
Manual XrefsDatabases
C00361KEGG COMPOUND
C00361KEGG COMPOUND
DB03491DrugBank
DGIPDBeChem
C00019355KNApSAcK
HMDB0000960HMDB
YMDB00898YMDB
ECMDB00960ECMDB
Deoxyguanosine_diphosphateWikipedia
DGDPMetaCyc
Registry NumbersSources
Reaxys:68703Reaxys
Citations