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CHEBI:17802 - pseudouridine

ChEBI IDCHEBI:17802
ChEBI Namepseudouridine
Stars
DefinitionA C-glycosyl pyrimidine that consists of uracil having a β-D-ribofuranosyl residue attached at position 5. The C-glycosyl isomer of the nucleoside uridine.
Secondary ChEBI IDsCHEBI:8610, CHEBI:14964, CHEBI:26364
Last Modified23 October 2015
DownloadsMolfile
FormulaC9H12N2O6
Net Charge0
Average Mass244.203
Monoisotopic Mass244.06954
SMILESO=c1ncc([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=O)n1
InChIInChI=1S/C9H12N2O6/c12-2-4-5(13)6(14)7(17-4)3-1-10-9(16)11-8(3)15/h1,4-7,12-14H,2H2,(H2,10,11,15,16)/t4-,5-,6-,7+/m1/s1
InChIKeyPTJWIQPHWPFNBW-GBNDHIKLSA-N
Wikipedia
Species of MetaboliteComponentSourceComments
Daphnia magna (ncbitaxon:35525) - Article (Mixtures of similarly acting compounds in Daphnia magna: From gene to metabolite and beyondTine Vandenbrouck, Oliver A.H. Jones, Nathalie Dom, Julian L. Griffin, Wim De CoenEnvironment International 36 (2010) 254-268)
Homo sapiens (ncbitaxon:9606) - PubMed (21886157)
Roles Classification
Biological Role:
fundamental metabolite  Any metabolite produced by all living cells.
ChEBI Ontology
Outgoing Relation(s)
pseudouridine (CHEBI:17802) has role fundamental metabolite (CHEBI:78675)
pseudouridine (CHEBI:17802) is a pseudouridines (CHEBI:26366)
Incoming Relation(s)
N1-methylpseudouridine 5'-monophosphate (CHEBI:75078) has functional parent pseudouridine (CHEBI:17802)
N3-methylpseudouridine 5'-monophosphate (CHEBI:74731) has functional parent pseudouridine (CHEBI:17802)
pseudouridine 5'-phosphate (CHEBI:18116) has functional parent pseudouridine (CHEBI:17802)
IUPAC Name 
5-(β-D-ribofuranosyl)pyrimidine-2,4(1H,3H)-dione
Synonyms  Source
PseudouridineKEGG COMPOUND
(1S)-1,4-anhydro-1-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-5-yl)-D-ribitolChEBI
Ψ-uridineChEBI
5-(β-D-ribofuranosyl)uracilChEBI
pChEBI
β-PseudouridineHMDB
UniProt Name  Source
pseudouridineUniProt
Manual XrefsDatabases
C02067KEGG COMPOUND
HMDB0000767HMDB
CPD-497MetaCyc
PseudouridineWikipedia
C00001508KNApSAcK
Registry NumbersSources
Beilstein:32779Beilstein
Reaxys:621385Reaxys
CAS:1445-07-4KEGG COMPOUND
CAS:1445-07-4ChemIDplus
Citations