CHEBI:15354 - choline

ChEBI IDCHEBI:15354
ChEBI Namecholine
Stars
DefinitionA choline that is the parent compound of the cholines class, consisting of ethanolamine having three methyl substituents attached to the amino function.
Secondary ChEBI IDsCHEBI:3665, CHEBI:13985, CHEBI:23212, CHEBI:41524
Last Modified4 March 2019
SubmitterMarcus Ennis
DownloadsMolfile
FormulaC5H14NO
Net Charge+1
Average Mass104.173
Monoisotopic Mass104.10699
SMILESC[N+](C)(C)CCO
InChIInChI=1S/C5H14NO/c1-6(2,3)4-5-7/h7H,4-5H2,1-3H3/q+1
InChIKeyOEYIOHPDSNJKLS-UHFFFAOYSA-N
Wikipedia
Species of MetaboliteComponentSourceComments
Arabidopsis thaliana (ncbitaxon:3702) - DOI (10.1074/jbc.M302362200)
Daphnia magna (ncbitaxon:35525) - Article (Mixtures of similarly acting compounds in Daphnia magna: From gene to metabolite and beyondTine Vandenbrouck, Oliver A.H. Jones, Nathalie Dom, Julian L. Griffin, Wim De CoenEnvironment International 36 (2010) 254-268)
Escherichia coli (ncbitaxon:562) - PubMed (21988831)
Homo sapiens (ncbitaxon:9606) - DOI (10.1038/nbt.2488)
Mus musculus (ncbitaxon:10090) - PubMed (19425150) Source: BioModels - MODEL1507180067
Saccharomyces cerevisiae (ncbitaxon:4932) - PubMed (24678285) Source: yeast.sf.net
Roles Classification
Biological Roles:
Saccharomyces cerevisiae metabolite  Any fungal metabolite produced during a metabolic reaction in Baker's yeast (Saccharomyces cerevisiae ).
allergen  A chemical compound, or part thereof, which causes the onset of an allergic reaction by interacting with any of the molecular pathways involved in an allergy.
Daphnia magna metabolite  A Daphnia metabolite produced by the species Daphnia magna.
Escherichia coli metabolite  Any bacterial metabolite produced during a metabolic reaction in Escherichia coli.
nutrient  A nutrient is a food component that an organism uses to survive and grow.
mouse metabolite  Any mammalian metabolite produced during a metabolic reaction in a mouse (Mus musculus).
human metabolite  Any mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens).
neurotransmitter  An endogenous compound that is used to transmit information across the synapse between a neuron and another cell.
plant metabolite  Any eukaryotic metabolite produced during a metabolic reaction in plants, the kingdom that include flowering plants, conifers and other gymnosperms.
ChEBI Ontology
Outgoing Relation(s)
choline (CHEBI:15354) has role Daphnia magna metabolite (CHEBI:83056)
choline (CHEBI:15354) has role Escherichia coli metabolite (CHEBI:76971)
choline (CHEBI:15354) has role Saccharomyces cerevisiae metabolite (CHEBI:75772)
choline (CHEBI:15354) has role allergen (CHEBI:50904)
choline (CHEBI:15354) has role human metabolite (CHEBI:77746)
choline (CHEBI:15354) has role mouse metabolite (CHEBI:75771)
choline (CHEBI:15354) has role neurotransmitter (CHEBI:25512)
choline (CHEBI:15354) has role nutrient (CHEBI:33284)
choline (CHEBI:15354) has role plant metabolite (CHEBI:76924)
choline (CHEBI:15354) is a cholines (CHEBI:23217)
Incoming Relation(s)
choline ester (CHEBI:23213) has functional parent choline (CHEBI:15354)
choline chloride (CHEBI:133341) has part choline (CHEBI:15354)
IUPAC Name 
2-hydroxy-N,N,N-trimethylethanaminium
Synonyms  Source
BilineurineKEGG COMPOUND
CholineKEGG COMPOUND
CHOLINE IONPDBeChem
N,N,N-trimethylethanol-ammoniumChEBI
N-trimethylethanolamineChEBI
trimethylethanolamineChEBI
UniProt Name  Source
cholineUniProt
Manual XrefsDatabases
3097DrugCentral
C00007298KNApSAcK
C00114KEGG COMPOUND
C00114KEGG COMPOUND
CholineWikipedia
CHOLINEMetaCyc
CHTPDBeChem
D07690KEGG DRUG
DB00122DrugBank
ECMDB00097ECMDB
HMDB0000097HMDB
YMDB00227YMDB
Registry NumbersSources
Reaxys:1736748Reaxys
Gmelin:324597Gmelin
CAS:62-49-7KEGG COMPOUND
CAS:62-49-7ChemIDplus
Citations