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CHEBI:140074 - 5'-GUGACCC-3' RNA fragment

ChEBI IDCHEBI:140074
ChEBI Name5'-GUGACCC-3' RNA fragment
Stars
DefinitionAn RNA fragment comprised of two guanosine, one uridine, one adenosine and three cytidine residues connected by 3'→5' phosphodiester linkages in the sequence G-U-G-A-C-C-C.
Last Modified9 February 2018
SubmitterMarcus Ennis
DownloadsMolfile
FormulaC66H84N26O47P6
Net Charge0
Average Mass2179.377
Monoisotopic Mass2178.34078
SMILESNc1ccn([C@@H]2O[C@H](COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4ccc(N)nc4=O)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4ccc(N)nc4=O)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4cnc5c(N)ncnc54)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4cnc5c(=O)nc(N)nc54)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4ccc(=O)nc4=O)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4cnc5c(=O)nc(N)nc54)O[C@@H]3CO)[C@@H](O)[C@H]2O)c(=O)n1
InChIInChI=1S/C66H84N26O47P6/c67-27-1-5-86(63(105)78-27)54-35(96)34(95)21(128-54)10-121-140(109,110)135-43-22(129-55(37(43)98)87-6-2-28(68)79-64(87)106)12-123-142(113,114)136-44-23(130-56(38(44)99)88-7-3-29(69)80-65(88)107)13-124-144(117,118)138-46-25(132-58(40(46)101)90-17-75-31-48(70)73-16-74-49(31)90)14-125-145(119,120)139-47-26(133-60(41(47)102)92-19-77-33-51(92)83-62(72)85-53(33)104)15-126-143(115,116)137-45-24(131-57(39(45)100)89-8-4-30(94)81-66(89)108)11-122-141(111,112)134-42-20(9-93)127-59(36(42)97)91-18-76-32-50(91)82-61(71)84-52(32)103/h1-8,16-26,34-47,54-60,93,95-102H,9-15H2,(H,109,110)(H,111,112)(H,113,114)(H,115,116)(H,117,118)(H,119,120)(H2,67,78,105)(H2,68,79,106)(H2,69,80,107)(H2,70,73,74)(H,81,94,108)(H3,71,82,84,103)(H3,72,83,85,104)/t20-,21-,22-,23-,24-,25-,26-,34-,35-,36-,37-,38-,39-,40-,41-,42-,43-,44-,45-,46-,47-,54-,55-,56-,57-,58-,59-,60-/m1/s1
InChIKeyRSFVEKJEFIPNRQ-RDNZLXEVSA-N
ChEBI Ontology
Outgoing Relation(s)
5'-GUGACCC-3' RNA fragment (CHEBI:140074) is a RNA fragment (CHEBI:82726)
IUPAC Name 
G-U-G-A-C-C-C
Synonym  Source
GpUpGpApCpCpCChEBI
Citations