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CHEBI:133593 - 5'-GUAUGCAUAGGC-3' RNA fragment

ChEBI IDCHEBI:133593
ChEBI Name5'-GUAUGCAUAGGC-3' RNA fragment
Stars
DefinitionAn RNA fragment comprised of four guanosine, three adenosine, three uridine and two cytidine residues connected by 3'→5' phosphodiester linkages in the sequence G-U-A-U-G-C-A-U-A-G-G-C.
Last Modified9 February 2018
SubmitterMarcus Ennis
DownloadsMolfile
FormulaC115H142N47O82P11
Net Charge0
Average Mass3835.362
Monoisotopic Mass3833.55001
SMILESNc1ccn([C@@H]2O[C@H](COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4cnc5c(=O)nc(N)nc54)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4cnc5c(=O)nc(N)nc54)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4cnc5c(N)ncnc54)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4ccc(=O)nc4=O)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4cnc5c(N)ncnc54)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4ccc(N)nc4=O)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4cnc5c(=O)nc(N)nc54)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4ccc(=O)nc4=O)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4cnc5c(N)ncnc54)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4ccc(=O)nc4=O)O[C@@H]3COP(=O)(O)O[C@H]3[C@@H](O)[C@H](n4cnc5c(=O)nc(N)nc54)O[C@@H]3CO)[C@@H](O)[C@H]2O)c(=O)n1
InChIInChI=1S/C115H142N47O82P11/c116-45-1-6-151(111(184)138-45)95-58(168)57(167)34(223-95)12-211-245(189,190)239-78-42(231-104(67(78)177)160-30-135-54-88(160)144-108(122)148-92(54)181)20-221-255(209,210)244-80-44(233-106(69(80)179)162-32-137-56-90(162)146-110(124)150-94(56)183)22-220-254(207,208)242-77-41(230-102(66(77)176)158-28-133-52-83(120)127-25-130-86(52)158)19-218-249(197,198)237-73-37(226-98(62(73)172)154-9-4-48(165)141-114(154)187)15-214-251(201,202)240-75-39(228-100(64(75)174)156-26-131-50-81(118)125-23-128-84(50)156)17-216-247(193,194)235-71-35(224-96(60(71)170)152-7-2-46(117)139-112(152)185)14-213-253(205,206)243-79-43(232-105(68(79)178)161-31-136-55-89(161)145-109(123)149-93(55)182)21-219-250(199,200)238-74-38(227-99(63(74)173)155-10-5-49(166)142-115(155)188)16-215-252(203,204)241-76-40(229-101(65(76)175)157-27-132-51-82(119)126-24-129-85(51)157)18-217-248(195,196)236-72-36(225-97(61(72)171)153-8-3-47(164)140-113(153)186)13-212-246(191,192)234-70-33(11-163)222-103(59(70)169)159-29-134-53-87(159)143-107(121)147-91(53)180/h1-10,23-44,57-80,95-106,163,167-179H,11-22H2,(H,189,190)(H,191,192)(H,193,194)(H,195,196)(H,197,198)(H,199,200)(H,201,202)(H,203,204)(H,205,206)(H,207,208)(H,209,210)(H2,116,138,184)(H2,117,139,185)(H2,118,125,128)(H2,119,126,129)(H2,120,127,130)(H,140,164,186)(H,141,165,187)(H,142,166,188)(H3,121,143,147,180)(H3,122,144,148,181)(H3,123,145,149,182)(H3,124,146,150,183)/t33-,34-,35-,36-,37-,38-,39-,40-,41-,42-,43-,44-,57-,58-,59-,60-,61-,62-,63-,64-,65-,66-,67-,68-,69-,70-,71-,72-,73-,74-,75-,76-,77-,78-,79-,80-,95-,96-,97-,98-,99-,100-,101-,102-,103-,104-,105-,106-/m1/s1
InChIKeyWGZSXPJEJVYOKM-WRKPEDSBSA-N
ChEBI Ontology
Outgoing Relation(s)
5'-GUAUGCAUAGGC-3' RNA fragment (CHEBI:133593) is a RNA fragment (CHEBI:82726)
IUPAC Name 
G-U-A-U-G-C-A-U-A-G-G-C
Synonym  Source
GpUpApUpGpCpApUpApGpGpCChEBI
Citations