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PDBsum entry 5u3c
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Protein fibril, ligase
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PDB id
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5u3c
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Generate full PROCHECK analyses
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PROCHECK summary for 5u3c
Ramachandran plot
PROCHECK statistics
1. Ramachandran Plot statistics
No. of
residues %-tage
------ ------
Most favoured regions [A,B,L] 1640 88.6%*
Additional allowed regions [a,b,l,p] 191 10.3%
Generously allowed regions [~a,~b,~l,~p] 10 0.5%
Disallowed regions [XX] 11 0.6%*
---- ------
Non-glycine and non-proline residues 1852 100.0%
End-residues (excl. Gly and Pro) 16
Glycine residues 172
Proline residues 96
----
Total number of residues 2136
Based on an analysis of 118 structures of resolution of at least 2.0 Angstroms and R-factor no greater than 20.0 a good
quality model would be expected to have over 90% in the most favoured regions [A,B,L].
2. G-Factors
Average
Parameter Score Score
--------- ----- -----
Dihedral angles:-
Phi-psi distribution -0.14
Chi1-chi2 distribution 0.48
Chi1 only 0.38
Chi3 & chi4 0.60
Omega 0.20
0.20
=====
Main-chain covalent forces:-
Main-chain bond lengths 0.51
Main-chain bond angles 0.43
0.46
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OVERALL AVERAGE 0.31
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G-factors provide a measure of how unusual, or out-of-the-ordinary, a property is.
Values below -0.5* - unusual
Values below -1.0** - highly unusual
Important note: The main-chain
bond-lengths and bond angles are compared with
the Engh & Huber (1991) ideal values derived
from small-molecule data. Therefore, structures
refined using different restraints may show
apparently large deviations from normality.
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