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PDBsum entry 5kpi

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protein Protein-protein interface(s) links
Hydrolase PDB id
5kpi

 

 

 

 

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JSmol PyMol  
Contents
Protein chains
1185 a.a.
PDB id:
5kpi
Name: Hydrolase
Title: Mouse native pgp
Structure: Multidrug resistance protein 1a. Chain: a, b. Synonym: atp-binding cassette sub-family b member 1a,mdr1a,multidrug resistance protein 3,p-glycoprotein 3. Engineered: yes
Source: Mus musculus. Mouse. Organism_taxid: 10090. Gene: abcb1a, abcb4, mdr1a, mdr3, pgy-3, pgy3. Expressed in: komagataella pastoris gs115. Expression_system_taxid: 644223
Resolution:
4.01Å     R-factor:   0.260     R-free:   0.303
Authors: D.Xia,L.Esser,F.Zhou
Key ref: L.Esser et al. (2017). Structures of the Multidrug Transporter P-glycoprotein Reveal Asymmetric ATP Binding and the Mechanism of Polyspecificity. J Biol Chem, 292, 446-461. PubMed id: 27864369 DOI: 10.1074/jbc.M116.755884
Date:
04-Jul-16     Release date:   30-Nov-16    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
P21447  (MDR1A_MOUSE) -  ATP-dependent translocase ABCB1 from Mus musculus
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1276 a.a.
1185 a.a.
Key:    PfamA domain  Secondary structure

 Enzyme reactions 
   Enzyme class 1: E.C.7.6.2.1  - P-type phospholipid transporter.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: ATP + H2O + phospholipidSide 1 = ADP + phosphate + phospholipidSide 2
ATP
+ H2O
+ phospholipidSide 1
= ADP
+ phosphate
+ phospholipidSide 2
   Enzyme class 2: E.C.7.6.2.2  - ABC-type xenobiotic transporter.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: ATP + H2O + xenobioticSide 1 = ADP + phosphate + xenobioticSide 2
ATP
+ H2O
+ xenobioticSide 1
= ADP
+ phosphate
+ xenobioticSide 2
Note, where more than one E.C. class is given (as above), each may correspond to a different protein domain or, in the case of polyprotein precursors, to a different mature protein.
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    reference    
 
 
DOI no: 10.1074/jbc.M116.755884 J Biol Chem 292:446-461 (2017)
PubMed id: 27864369  
 
 
Structures of the Multidrug Transporter P-glycoprotein Reveal Asymmetric ATP Binding and the Mechanism of Polyspecificity.
L.Esser, F.Zhou, K.M.Pluchino, J.Shiloach, J.Ma, W.K.Tang, C.Gutierrez, A.Zhang, S.Shukla, J.P.Madigan, T.Zhou, P.D.Kwong, S.V.Ambudkar, M.M.Gottesman, D.Xia.
 
  ABSTRACT  
 
No abstract given.

 

 

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