PDBsum entry 5kpi Go to PDB code:  Tunnel analysis for: 5kpi calculated with MOLE 2.0 PDB id 5kpi Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.12 1.69 54.1 1.79 0.36 1.3 80 0 0 3 13 5 0 0   2 1.20 1.95 20.7 -0.36 0.03 17.4 86 2 1 1 7 0 0 0   3 1.20 1.95 21.9 -0.10 0.36 16.4 79 3 0 1 7 1 0 0   4 1.30 1.75 19.9 2.82 1.00 3.9 88 1 0 0 8 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.