PDBsum entry 5kpi Go to PDB code:  Pore analysis for: 5kpi calculated with MOLE 2.0 PDB id 5kpi Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   23 pores, coloured by radius 23 pores, coloured by radius 23 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.44 3.45 25.6 -0.27 -0.48 2.5 94 0 0 4 6 1 0 0   2 1.39 1.74 29.0 2.52 0.84 0.8 86 0 0 0 7 2 0 0   3 1.53 1.70 30.9 0.48 0.12 9.6 80 1 2 0 5 2 1 0   4 1.54 1.71 42.5 -0.79 -0.22 19.9 83 4 5 2 5 2 0 0   5 1.64 1.87 42.6 -1.50 -0.54 20.8 88 2 4 2 3 0 0 0   6 1.36 1.37 44.5 -1.91 -0.24 20.3 76 6 3 2 4 3 1 0   7 1.31 1.72 47.1 0.98 0.20 1.7 89 0 0 3 9 2 0 0   8 1.71 2.51 56.4 -0.96 -0.33 14.4 89 3 2 5 5 0 1 0   9 1.31 1.31 62.1 -2.23 -0.66 24.8 90 5 4 8 2 0 0 1   10 1.32 1.31 69.9 -1.80 -0.56 22.4 91 4 3 6 2 0 0 1   11 1.42 1.41 83.9 -2.86 -0.66 32.9 81 11 11 5 2 2 1 0   12 1.53 1.70 111.8 -2.53 -0.47 30.4 80 15 13 5 6 5 0 0   13 1.24 1.22 222.4 -1.34 -0.33 20.1 84 11 12 9 12 3 2 0   14 1.26 1.26 316.7 -1.16 -0.27 18.4 83 17 14 20 17 6 2 2   15 3.57 3.81 27.0 -0.10 -0.34 2.2 91 0 0 4 8 1 0 0   16 1.48 1.61 29.3 1.47 0.23 1.3 83 0 0 4 9 2 0 0   17 1.78 2.43 33.3 0.10 -0.05 11.2 88 0 2 2 7 1 0 0   18 1.78 2.45 37.6 0.11 -0.06 7.4 83 1 2 4 7 2 1 0   19 1.26 1.49 44.2 0.70 0.01 1.9 89 0 0 5 12 1 0 0   20 1.28 1.49 59.0 0.54 0.11 6.6 83 1 2 6 11 3 1 0   21 1.30 2.34 38.4 1.40 0.63 10.1 85 3 1 1 14 1 0 0   22 1.34 1.80 48.7 -1.52 -0.37 16.4 78 7 3 5 7 1 3 0   23 1.06 1.34 71.1 0.11 0.15 13.3 84 5 5 5 23 2 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.