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PDBsum entry 5ju5

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protein Protein-protein interface(s) links
Signaling protein PDB id
5ju5

 

 

 

 

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JSmol PyMol  
Contents
Protein chains
60 a.a.
66 a.a.
61 a.a.
Waters ×24
PDB id:
5ju5
Name: Signaling protein
Title: Crystal structure of the human tankyrase 1 (tnks) sam domain (d1055r), crystal form 1
Structure: Tankyrase-1. Chain: a, b, c, d, e, f. Fragment: unp residues 1018-1093. Synonym: tank1,adp-ribosyltransferase diphtheria toxin-like 5,artd5, poly [adp-ribose] polymerase 5a,tnks-1,trf1-interacting ankyrin- related adp-ribose polymerase,tankyrase i. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: tnks, parp5a, parpl, tin1, tinf1, tnks1. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
2.50Å     R-factor:   0.192     R-free:   0.211
Authors: S.Guetter,L.Mariotti,N.Cronin
Key ref: L.Mariotti et al. (2016). Tankyrase Requires SAM Domain-Dependent Polymerization to Support Wnt-β-Catenin Signaling. Mol Cell, 63, 498-513. PubMed id: 27494558 DOI: 10.1016/j.molcel.2016.06.019
Date:
10-May-16     Release date:   03-Aug-16    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
O95271  (TNKS1_HUMAN) -  Poly [ADP-ribose] polymerase tankyrase-1 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1327 a.a.
60 a.a.*
Protein chain
Pfam   ArchSchema ?
O95271  (TNKS1_HUMAN) -  Poly [ADP-ribose] polymerase tankyrase-1 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1327 a.a.
66 a.a.*
Protein chain
Pfam   ArchSchema ?
O95271  (TNKS1_HUMAN) -  Poly [ADP-ribose] polymerase tankyrase-1 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1327 a.a.
61 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 3 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class 1: Chains A, B, C, D, E, F: E.C.2.4.2.-  - ?????
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
   Enzyme class 2: Chains A, B, C, D, E, F: E.C.2.4.2.30  - NAD(+) ADP-ribosyltransferase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

      Pathway:
      Reaction: NAD+ + (ADP-D-ribosyl)n-acceptor = nicotinamide + (ADP-D- ribosyl)n+1-acceptor + H+
NAD(+)
+ (ADP-D-ribosyl)n-acceptor
= nicotinamide
+ (ADP-D- ribosyl)n+1-acceptor
+ H(+)
Note, where more than one E.C. class is given (as above), each may correspond to a different protein domain or, in the case of polyprotein precursors, to a different mature protein.
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
DOI no: 10.1016/j.molcel.2016.06.019 Mol Cell 63:498-513 (2016)
PubMed id: 27494558  
 
 
Tankyrase Requires SAM Domain-Dependent Polymerization to Support Wnt-β-Catenin Signaling.
L.Mariotti, C.M.Templeton, M.Ranes, P.Paracuellos, N.Cronin, F.Beuron, E.Morris, S.Guettler.
 
  ABSTRACT  
 
The poly(ADP-ribose) polymerase (PARP) Tankyrase (TNKS and TNKS2) is paramount to Wnt-β-catenin signaling and a promising therapeutic target in Wnt-dependent cancers. The pool of active β-catenin is normally limited by destruction complexes, whose assembly depends on the polymeric master scaffolding protein AXIN. Tankyrase, which poly(ADP-ribosyl)ates and thereby destabilizes AXIN, also can polymerize, but the relevance of these polymers has remained unclear. We report crystal structures of the polymerizing TNKS and TNKS2 sterile alpha motif (SAM) domains, revealing versatile head-to-tail interactions. Biochemical studies informed by these structures demonstrate that polymerization is required for Tankyrase to drive β-catenin-dependent transcription. We show that the polymeric state supports PARP activity and allows Tankyrase to effectively access destruction complexes through enabling avidity-dependent AXIN binding. This study provides an example for regulated signal transduction in non-membrane-enclosed compartments (signalosomes), and it points to novel potential strategies to inhibit Tankyrase function in oncogenic Wnt signaling.
 

 

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