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PDBsum entry 3w2c

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3w2c calculated with MOLE 2.0 PDB id
3w2c
Pores calculated on whole structure Pores calculated excluding ligands

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9 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.25 3.85 27.4 -1.47 -0.52 8.1 81 3 2 3 1 2 0 0  
2 2.89 2.89 30.0 -1.88 -0.66 24.8 80 4 4 0 2 1 0 0  
3 2.90 2.90 38.0 -1.94 -0.42 21.0 81 6 4 2 2 2 0 0  
4 2.93 3.09 65.0 -2.25 -0.47 25.4 78 8 6 2 1 4 1 0  
5 3.15 3.47 69.1 -1.99 -0.28 19.2 78 10 4 4 1 4 1 0  
6 1.48 1.90 29.7 -1.99 -0.48 15.6 81 4 2 2 0 2 0 0  
7 2.35 2.79 29.7 -2.69 -0.63 27.7 83 5 3 4 0 1 0 0  
8 2.21 3.11 32.1 0.65 0.22 16.1 71 2 2 1 9 1 0 0  N15 401 A
9 2.35 2.79 33.8 -2.55 -0.65 27.9 81 5 5 2 0 2 0 0  
10 3.20 3.49 34.8 -2.34 -0.53 25.7 73 7 0 2 0 2 2 0  
11 2.08 3.52 43.9 -1.26 -0.26 16.4 78 4 3 2 3 2 0 0  N15 401 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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