 |
PDBsum entry 3w2c
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 3w2c calculated with MOLE 2.0
|
PDB id
|
|
|
|
3w2c
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
9 pores,
coloured by radius |
 |
11 pores,
coloured by radius
|
11 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.25 |
3.85 |
27.4 |
-1.47 |
-0.52 |
8.1 |
81 |
 |
3 |
2 |
3 |
1 |
2 |
0 |
0 |
 |
|
 |
 |
2 |
 |
2.89 |
2.89 |
30.0 |
-1.88 |
-0.66 |
24.8 |
80 |
4 |
4 |
0 |
2 |
1 |
0 |
0 |
|
 |
3 |
 |
2.90 |
2.90 |
38.0 |
-1.94 |
-0.42 |
21.0 |
81 |
6 |
4 |
2 |
2 |
2 |
0 |
0 |
|
 |
4 |
 |
2.93 |
3.09 |
65.0 |
-2.25 |
-0.47 |
25.4 |
78 |
8 |
6 |
2 |
1 |
4 |
1 |
0 |
|
 |
5 |
 |
3.15 |
3.47 |
69.1 |
-1.99 |
-0.28 |
19.2 |
78 |
10 |
4 |
4 |
1 |
4 |
1 |
0 |
|
 |
6 |
 |
1.48 |
1.90 |
29.7 |
-1.99 |
-0.48 |
15.6 |
81 |
4 |
2 |
2 |
0 |
2 |
0 |
0 |
|
 |
7 |
 |
2.35 |
2.79 |
29.7 |
-2.69 |
-0.63 |
27.7 |
83 |
5 |
3 |
4 |
0 |
1 |
0 |
0 |
|
 |
8 |
 |
2.21 |
3.11 |
32.1 |
0.65 |
0.22 |
16.1 |
71 |
2 |
2 |
1 |
9 |
1 |
0 |
0 |
N15 401 A
|
 |
9 |
 |
2.35 |
2.79 |
33.8 |
-2.55 |
-0.65 |
27.9 |
81 |
5 |
5 |
2 |
0 |
2 |
0 |
0 |
|
 |
10 |
 |
3.20 |
3.49 |
34.8 |
-2.34 |
-0.53 |
25.7 |
73 |
7 |
0 |
2 |
0 |
2 |
2 |
0 |
|
 |
11 |
 |
2.08 |
3.52 |
43.9 |
-1.26 |
-0.26 |
16.4 |
78 |
4 |
3 |
2 |
3 |
2 |
0 |
0 |
N15 401 A
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |