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PDBsum entry 3d14

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protein ligands links
Transferase PDB id
3d14

 

 

 

 

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Contents
Protein chain
262 a.a. *
Ligands
AK1
Waters ×215
* Residue conservation analysis
PDB id:
3d14
Name: Transferase
Title: Crystal structure of mouse aurora a (asn186->gly, lys240->arg, met302- >leu) in complex with 1-{5-[2-(thieno[3,2-d]pyrimidin-4-ylamino)- ethyl]- thiazol-2-yl}-3-(3-trifluoromethyl-phenyl)-urea
Structure: Serine/threonine kinase 6. Chain: a. Fragment: aurora a kinase domain, unp residues 116-382. Engineered: yes. Mutation: yes
Source: Mus musculus. Mouse. Organism_taxid: 10090. Gene: aurka, stk6. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
1.90Å     R-factor:   0.213     R-free:   0.257
Authors: R.A.Elling,S.Baskaran,D.A.Allen,J.D.Oslob,M.J.Romanowski
Key ref: J.D.Oslob et al. (2008). Discovery of a potent and selective aurora kinase inhibitor. Bioorg Med Chem Lett, 18, 4880-4884. PubMed id: 18678489 DOI: 10.1016/j.bmcl.2008.07.073
Date:
04-May-08     Release date:   26-Aug-08    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P97477  (AURKA_MOUSE) -  Aurora kinase A from Mus musculus
Seq:
Struc:
395 a.a.
262 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 7 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: E.C.2.7.11.1  - non-specific serine/threonine protein kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction:
1. L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H+
2. L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H+
L-seryl-[protein]
+ ATP
= O-phospho-L-seryl-[protein]
+ ADP
+ H(+)
L-threonyl-[protein]
+ ATP
= O-phospho-L-threonyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    reference    
 
 
DOI no: 10.1016/j.bmcl.2008.07.073 Bioorg Med Chem Lett 18:4880-4884 (2008)
PubMed id: 18678489  
 
 
Discovery of a potent and selective aurora kinase inhibitor.
J.D.Oslob, M.J.Romanowski, D.A.Allen, S.Baskaran, M.Bui, R.A.Elling, W.M.Flanagan, A.D.Fung, E.J.Hanan, S.Harris, S.A.Heumann, U.Hoch, J.W.Jacobs, J.Lam, C.E.Lawrence, R.S.McDowell, M.A.Nannini, W.Shen, J.A.Silverman, M.M.Sopko, B.T.Tangonan, J.Teague, J.C.Yoburn, C.H.Yu, M.Zhong, K.M.Zimmerman, T.O'Brien, W.Lew.
 
  ABSTRACT  
 
This communication describes the discovery of a novel series of Aurora kinase inhibitors. Key SAR and critical binding elements are discussed. Some of the more advanced analogues potently inhibit cellular proliferation and induce phenotypes consistent with Aurora kinase inhibition. In particular, compound 21 (SNS-314) is a potent and selective Aurora kinase inhibitor that exhibits significant activity in pre-clinical in vivo tumor models.
 

Literature references that cite this PDB file's key reference

  PubMed id Reference
21421314 A.Yan, Y.Chong, L.Wang, X.Hu, and K.Wang (2011).
Prediction of biological activity of Aurora-A kinase inhibitors by multilinear regression analysis and support vector machine.
  Bioorg Med Chem Lett, 21, 2238-2243.  
21151441 B.Zhang, Y.Li, H.Zhang, and C.Ai (2010).
3D-QSAR and Molecular Docking Studies on Derivatives of MK-0457, GSK1070916 and SNS-314 as Inhibitors against Aurora B Kinase.
  Int J Mol Sci, 11, 4326-4347.  
19649632 J.P.Arbitrario, B.J.Belmont, M.J.Evanchik, W.M.Flanagan, R.V.Fucini, S.K.Hansen, S.O.Harris, A.Hashash, U.Hoch, J.N.Hogan, A.R.Howlett, J.W.Jacobs, J.W.Lam, S.C.Ritchie, M.J.Romanowski, J.A.Silverman, D.E.Stockett, J.N.Teague, K.M.Zimmerman, and P.Taverna (2010).
SNS-314, a pan-Aurora kinase inhibitor, shows potent anti-tumor activity and dosing flexibility in vivo.
  Cancer Chemother Pharmacol, 65, 707-717.  
20039358 M.S.Coumar, M.T.Tsai, C.Y.Chu, B.J.Uang, W.H.Lin, C.Y.Chang, T.Y.Chang, J.S.Leou, C.H.Teng, J.S.Wu, M.Y.Fang, C.H.Chen, J.T.Hsu, S.Y.Wu, Y.S.Chao, and H.P.Hsieh (2010).
Identification, SAR studies, and X-ray co-crystallographic analysis of a novel furanopyrimidine aurora kinase A inhibitor.
  ChemMedChem, 5, 255-267.
PDB code: 3k5u
19199284 T.Sardon, T.Cottin, J.Xu, A.Giannis, and I.Vernos (2009).
Development and biological evaluation of a novel aurora a kinase inhibitor.
  Chembiochem, 10, 464-478.  
18991785 X.Tao, H.S.Chon, S.Fu, J.J.Kavanagh, and W.Hu (2008).
Update on aurora kinase inhibitors in gynecologic malignancies.
  Recent Pat Anticancer Drug Discov, 3, 162-177.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time. Where a reference describes a PDB structure, the PDB code is shown on the right.

 

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