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PDBsum entry 2ly7

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protein links
Transcription PDB id
2ly7

 

 

 

 

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JSmol PyMol  
Contents
Protein chain
139 a.a.
PDB id:
2ly7
Name: Transcription
Title: B-flap domain of RNA polymerase (b. Subtilis)
Structure: DNA-directed RNA polymerase subunit beta. Chain: a. Synonym: rnap subunit beta, RNA polymerase subunit beta, transcriptase subunit beta. Engineered: yes
Source: Bacillus subtilis. Organism_taxid: 224308. Strain: 168. Gene: rpob, crse, rfm, bsu01070. Expressed in: escherichia coli. Expression_system_taxid: 511693.
NMR struc: 20 models
Authors: M.Mobli
Key ref: C.Ma et al. (2015). RNA polymerase-induced remodelling of NusA produces a pause enhancement complex. Nucleic Acids Res, 43, 2829-2840. PubMed id: 25690895 DOI: 10.1093/nar/gkv108
Date:
12-Sep-12     Release date:   12-Mar-14    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
P37870  (RPOB_BACSU) -  DNA-directed RNA polymerase subunit beta from Bacillus subtilis (strain 168)
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1193 a.a.
139 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.2.7.7.6  - DNA-directed Rna polymerase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: RNA(n) + a ribonucleoside 5'-triphosphate = RNA(n+1) + diphosphate
RNA(n)
+ ribonucleoside 5'-triphosphate
= RNA(n+1)
+ diphosphate
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
DOI no: 10.1093/nar/gkv108 Nucleic Acids Res 43:2829-2840 (2015)
PubMed id: 25690895  
 
 
RNA polymerase-induced remodelling of NusA produces a pause enhancement complex.
C.Ma, M.Mobli, X.Yang, A.N.Keller, G.F.King, P.J.Lewis.
 
  ABSTRACT  
 
No abstract given.

 

 

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