_EC 2.7.7.6 DNA-directed Rna polymerase. 223 PDB entries  
EC 2.-.-.- Transferases. [17,772 PDB entries]
EC 2.7.-.- Transferring phosphorous-containing groups. [10,822 PDB entries]
EC 2.7.7.- Nucleotidyltransferases. [4,459 PDB entries]
EC 2.7.7.6 DNA-directed Rna polymerase. [223 PDB entries]    
1aro

Reaction: Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).
 


Nucleoside triphosphate
+
RNA(n)
=
diphosphate
+
RNA(n+1)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site.

Other name(s): DNA-dependent Rna polymerase. Rna nucleotidyltransferase (DNA-directed). Rna polymerase i. Rna polymerase ii. Rna polymerase iii.
Comments: Catalyzes DNA-template-directed extension of the 3'-end of an Rna strand by one nucleotide at a time. Can initiate a chain de novo. In eukaryotes three forms of the enzyme have been distinguished on the basis of sensitivity of alpha-amanitin, and the type of Rna synthesized. See also Ec 2.7.7.19 and Ec 2.7.7.48.
Links:   [IntEnz]   [ExPASy]   [KEGG]  

There are 223 PDB entries in enzyme class E.C.2.7.7.6

  PDB code Protein
1aro
T7 RNA polymerase complexed with t7 lysozyme
Source: Enterobacteria phage t7. Organism_taxid: 10760. Gene: t7. Expressed in: escherichia coli bl21. Expression_system_taxid: 511693.
Chain: P (774 residues) CATH domains: 1.10.1320.10 1.10.287.260 3.30.70.370 1.10.287.280 1.10.150.20
1bdf
Structure of escherichia coli RNA polymerase alpha subunit n-terminal domain
Source: Escherichia coli. Organism_taxid: 562. Cell_line: bl-21. Expressed in: escherichia coli. Expression_system_taxid: 562. Expression_system_cell_line: bl-21.
Chains: A, B, C, D (226 residues) CATH domains: 3.30.1360.10 2.170.120.12
1cez
Crystal structure of a t7 RNA polymerase-t7 promoter complex
Source: Synthetic: yes. Enterobacteria phage t7. Organism_taxid: 10760. Expressed in: escherichia coli bl21. Expression_system_taxid: 511693.
Chain: A (862 residues) CATH domains: 1.10.1320.10 1.10.287.260 3.30.70.370 1.10.287.280 1.10.150.20
1coo
The cooh-terminal domain of RNA polymerase alpha subunit
Source: Escherichia coli. Organism_taxid: 83333. Strain: k12. Cell_line: nh315. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chain: A (81 residues) CATH domain: 1.10.150.20
1ddq
Crystal structure of thermus aquaticus core RNA polymerase at 3.3 a resolution
Source: Thermus aquaticus. Bacteria. Bacteria
Chains: A, B, C, D, E (226 residues) CATH domains: 3.30.1360.10 2.170.120.12
1doq
ThE C-terminal domain of the RNA polymerase alpha subunit from thermus thermophilus
Source: Thermus thermophilus. Organism_taxid: 274. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chain: A (69 residues) CATH domain: 1.10.150.20
1ef4
Solution structure of the essential RNA polymerase subunit rpb10 from methanobacterium thermoautotrophicum
Source: Methanothermobacter thermautotrophicus. Organism_taxid: 145262. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chain: A (55 residues) CATH domain: 1.10.10.60
1eik
Solution structure of RNA polymerase subunit rpb5 from methanobacterium thermoautotrophicum
Source: Methanothermobacter thermautotrophicus. Organism_taxid: 145262. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chain: A (77 residues) CATH domain: 3.90.940.20
1en0
Crystallographic backbone model of RNA polymerase ii
Source: Saccharomyces cerevisiae. Yeast. Yeast
Chains: A, B, C, K, E, F, H, I, J, L (1213 residues)
1go3
Structure of an archeal homolog of the eukaryotic RNA polymerase ii rpb4/rpb7 complex
Source: Methanococcus jannaschii. Organism_taxid: 2190. Expressed in: escherichia coli. Expression_system_taxid: 511693. Expression_system_variant: de3. Other_details: co-expressed using a bicistrionic expression strategy. Expression strategy
Chains: E, M (177 residues) CATH domains: 2.40.50.140 3.30.1490.120
1h38
Structure of a t7 RNA polymerase elongation complex at 2.9a resolution
Source: Bacteriophage t7. Organism_taxid: 10760. Expressed in: escherichia coli. Expression_system_taxid: 511693. Expression_system_cell_line: dcat4. Synthetic: yes. Organism_taxid: 10760
Chains: A, B, C, D (857 residues) CATH domains: 1.10.1320.10 1.10.287.260 3.30.70.370 1.10.287.280 1.10.150.20
1hmj
Solution structure of RNA polymerase subunit h
Source: Methanocaldococcus jannaschii. Organism_taxid: 2190. Expressed in: escherichia coli. Expression_system_taxid: 562
Chain: A (68 residues)
1hqm
Crystal structure of thermus aquaticus core RNA polymerase- includes complete structure with side-chains (except for disordered regions)-further refined from original deposition-contains additional sequence information
Source: Thermus aquaticus. Organism_taxid: 271. Organism_taxid: 271
Chains: A, B, C, D, E (223 residues) CATH domains: 3.30.1360.10 2.170.120.12
1i3q
RNA polymerase ii crystal form i at 3.1 a resolution
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: delta-rpb4. Strain: delta-rpb4
Chains: A, B (1414 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
1i50
RNA polymerase ii crystal form ii at 2.8 a resolution
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: delta-rpb4. Strain: delta-rpb4
Chains: A, B (1419 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
1i6h
RNA polymerase ii elongation complex
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Synthetic: yes. Other_details: the RNA was synthesized by the polymerase before the crystal was formed.. Strain: delta-rpb4. Strain: delta-rpb4
Chains: A, B (1381 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
1i6v
Thermus aquaticus core RNA polymerase-rifampicin complex
Source: Thermus aquaticus. Organism_taxid: 271. Organism_taxid: 271
Chains: A, B, C, D, E (224 residues) CATH domains: 3.30.1360.10 2.170.120.12
1iw7
Crystal structure of the RNA polymerase holoenzyme from thermus thermophilus at 2.6a resolution
Source: Thermus thermophilus. Organism_taxid: 274. Organism_taxid: 274
Chains: A, B, C, D, E, K, L, M, N, O (229 residues) CATH domains: 3.30.1360.10 2.170.120.12
1k83
Crystal structure of yeast RNA polymerase ii complexed with inhibitor alpha amanitin
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: delta-rpb4. Amanita phalloides. Organism_taxid: 67723
Chains: A, B (1366 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
1l9u
Thermus aquaticus RNA polymerase holoenzyme at 4 a resolution
Source: Thermus aquaticus. Organism_taxid: 271. Gene: rpod. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Chains: A, B, C, D, E, J, K, L, M, N (224 residues)
1l9z
Thermus aquaticus RNA polymerase holoenzyme/fork-junction promoter DNA complex at 6.5 a resolution
Source: Synthetic: yes. Thermus aquaticus. Organism_taxid: 271. Gene: rpod. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Chains: A, B, C, D, E (224 residues)
1lb2
Structure of the e. Coli alpha c-terminal domain of RNA polymerase in complex with cap and DNA
Source: Synthetic: yes. Escherichia coli. Organism_taxid: 562. Expressed in: escherichia coli. Expression_system_taxid: 562. Expression_system_taxid: 562
Chains: B, E (72 residues) CATH domain: 1.10.150.20
1msw
Structural basis for the transition from initiation to elongation transcription in t7 RNA polymerase
Source: Synthetic: yes. Other_details: this sequence occurs naturally in bacteriophage t7. Enterobacteria phage t7. Organism_taxid: 10760. Expressed in: escherichia coli bl21. Expression_system_taxid: 511693.
Chain: D (863 residues) CATH domains: 1.10.1320.10 1.10.287.260 3.30.70.370 1.10.287.280 1.10.150.20
1nik
Wild type RNA polymerase ii
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Organism_taxid: 4932
Chains: A, B (1388 residues)
1nt9
Complete 12-subunit RNA polymerase ii
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: delta-rpb4. Expressed in: escherichia coli. Expression_system_taxid: 562. Strain: delta-rpb4
Chains: A, B (1383 residues)
1pqv
RNA polymerase ii-tfiis complex
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Organism_taxid: 4932
Chains: A, B (1409 residues)
1qln
Structure of a transcribing t7 RNA polymerase initiation complex
Source: Bacteriophage t7. Organism_taxid: 10760. Expressed in: escherichia coli. Expression_system_taxid: 511693. Synthetic: yes. Synthetic: yes
Chain: A (862 residues) CATH domains: 1.10.1320.10 1.10.287.260 3.30.70.370 1.10.287.280 1.10.150.20
1qyp
Thermococcus celer rpb9, nmr, 25 structures
Source: Thermococcus celer. Organism_taxid: 2264. Cell_line: bl21. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chain: A (57 residues) CATH domain: 2.20.25.10
1r5u
RNA polymerase ii tfiib complex
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: delta-rpb4. Gene: sua7. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B (1380 residues)
1r9r
RNA polymerase ii strand separated elongation complex
Source: Saccharomyces cerevisiae. Yeast. Strain: delta-rpb4. Synthetic: yes. Synthetic: yes
Chains: A, B, C, E, F, H, I, J, K, L (1395 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
1r9s
RNA polymerase ii strand separated elongation complex, matched nucleotide
Source: Synthetic: yes. Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: delta-rpb4. Strain: delta-rpb4
Chains: A, B (1381 residues)
Bound ligand:   Het Group UTP is 70.00% similar to enzyme reactant NTP
1r9t
RNA polymerase ii strand separated elongation complex, mismatched nucleotide
Source: Synthetic: yes. Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: delta-rpb4. Strain: delta-rpb4
Chains: A, B (1395 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
Bound ligand:   Het Group ATP is 65.00% similar to enzyme reactant NTP
1s0v
Structural basis for substrate selection by t7 RNA polymerase
Source: Synthetic: yes. Enterobacteria phage t7. Organism_taxid: 10760. Gene: 1. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C, D (857 residues) CATH domains: 1.10.1320.10 1.10.287.260 3.30.70.370 1.10.287.280 1.10.150.20
1s76
T7 RNA polymerase alpha beta methylene atp elongation complex
Source: Synthetic: yes. Other_details: DNA oligomer is synthesized. Other_details: RNA oligomer is synthesized. Enterobacteria phage t7. Organism_taxid: 10760. Expressed in: escherichia coli. Expression_system_taxid: 562
Chain: D (829 residues) CATH domains: 1.10.1320.10 1.10.287.260 3.30.70.370 1.10.287.280 1.10.150.20
1s77
T7 rnap product pyrophosphate elongation complex
Source: Synthetic: yes. Other_details: DNA oligomer is synthesized. Other_details: RNA oligomer is synthesized. Enterobacteria phage t7. Organism_taxid: 10760. Gene: 1. Expressed in: escherichia coli. Expression_system_taxid: 562
Chain: D (828 residues) CATH domains: 1.10.1320.10 1.10.287.260 3.30.70.370 1.10.287.280 1.10.150.20
Bound ligand:   Het Group POP corresponds to enzyme product diphosphate
1sfo
RNA polymerase ii strand separated elongation complex
Source: Synthetic: yes. Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: delta-rpb4. Strain: delta-rpb4
Chains: A, B (1395 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
1smy
Structural basis for transcription regulation by alarmone ppgpp
Source: Thermus thermophilus. Organism_taxid: 274. Organism_taxid: 274
Chains: A, B, C, D, E, K, L, M, N, O (229 residues) CATH domains: 3.30.1360.10 2.170.120.12
Bound ligand:   Het Group G4P is 41.00% similar to enzyme reactant NTP
1ti9
A model of the ternary complex formed between mara, the alpha-ctd of RNA polymerase and DNA
Source: Escherichia coli. Bacteria. Gene: mara, b1531, z2170, ecs2138, sf1563, s1690. Expressed in: escherichia coli. Synthetic: yes. Gene: rpoa, pez, phs, sez, b3295, c4056, z4665, ecs4160, stm3415, sty4383, t4090, sf3327, s4435.
Chain: D (81 residues) CATH domain: 1.10.150.20
1twa
RNA polymerase ii complexed with atp
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: delta-rpb4. Strain: delta-rpb4
Chains: A, B (1352 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
Bound ligand:   Het Group ATP is 65.00% similar to enzyme reactant NTP
1twc
RNA polymerase ii complexed with gtp
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: delta-rpb4. Strain: delta-rpb4
Chains: A, B (1351 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
Bound ligand:   Het Group GTP is 63.00% similar to enzyme reactant NTP
1twf
RNA polymerase ii complexed with utp at 2.3 a resolution
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: delta-rpb4. Strain: delta-rpb4
Chains: A, B (1419 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
Bound ligand:   Het Group UTP is 70.00% similar to enzyme reactant NTP
1twg
RNA polymerase ii complexed with ctp
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: delta-rpb4. Strain: delta-rpb4
Chains: A, B (1349 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
Bound ligand:   Het Group CTP is 70.00% similar to enzyme reactant NTP
1twh
RNA polymerase ii complexed with 2'datp
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: delta-rpb4. Strain: delta-rpb4
Chains: A, B (1349 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
Bound ligand:   Het Group ATP is 62.00% similar to enzyme reactant NTP
1wcm
Complete 12-subunit RNA polymerase ii at 3.8 ang
Source: Saccharomyces cerevisiae. Yeast. Organism_taxid: 4932. Expressed in: escherichia coli. Expression_system_taxid: 469008. Organism_taxid: 4932
Chains: A, B (1416 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
1xpp
Crystal structure of ta1416,DNA-directed RNA polymerase subu from thermoplasma acidophilum
Source: Thermoplasma acidophilum. Organism_taxid: 2303. Gene: rpol. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Chains: A, B, C, D (99 residues) CATH domain: 3.30.1360.10
1xs9
A model of the ternary complex formed between mara, the alpha-ctd of RNA polymerase and DNA
Source: Escherichia coli. Organism_taxid: 562. Gene: mara. Expressed in: escherichia coli. Expression_system_taxid: 562. Synthetic: yes. Gene: rpoa, pez, phs, sez.
Chain: D (81 residues) CATH domain: 1.10.150.20
1y1v
Refined RNA polymerase ii-tfiis complex
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B (1426 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
1y1w
Complete RNA polymerase ii elongation complex
Source: Synthetic: yes. Other_details: synthetic oligonucleotide. Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Organism_taxid: 4932
Chains: A, B (1416 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
1y1y
RNA polymerase ii-tfiis-DNA/RNA complex
Source: Synthetic: yes. Other_details: synthetic oligonucleotide. Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Gene: dst1. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B (1426 residues)
1y77
Complete RNA polymerase ii elongation complex with substrate gmpcpp
Source: Synthetic: yes. Other_details: synthetic oligonucleotide. Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Organism_taxid: 4932
Chains: A, B (1416 residues)
1ynj
Taq RNA polymerase-sorangicin complex
Source: Thermus aquaticus. Organism_taxid: 271. Organism_taxid: 271
Chains: A, B, C, D, J, K (230 residues) CATH domains: 3.30.1360.10 2.170.120.12
1ynn
Taq RNA polymerase-rifampicin complex
Source: Thermus aquaticus. Organism_taxid: 271. Organism_taxid: 271
Chains: A, B, C, D, J, K (230 residues) CATH domains: 3.30.1360.10 2.170.120.12
1z3e
Crystal structure of spx in complex with thE C-terminal domain of the RNA polymerase alpha subunit
Source: Bacillus subtilis. Organism_taxid: 1423. Gene: spxa. Expressed in: escherichia coli bl21. Expression_system_taxid: 511693. Gene: rpoa.
Chain: B (67 residues) CATH domain: 1.10.150.20
1zyr
Structure of thermus thermophilus RNA polymerase holoenzyme in complex with the antibiotic streptolydigin
Source: Thermus thermophilus. Organism_taxid: 274. Organism_taxid: 274
Chains: A, B, C, D, E, K, L, M, N, O (229 residues) CATH domains: 3.30.1360.10 2.170.120.12
2a68
Crystal structure of the t. Thermophilus RNA polymerase holoenzyme in complex with antibiotic rifabutin
Source: Thermus thermophilus. Organism_taxid: 274. Organism_taxid: 274
Chains: A, B, C, D, E, K, L, M, N, O (229 residues) CATH domains: 3.30.1360.10 2.170.120.12
2a69
Crystal structure of the t. Thermophilus RNA polymerase holoenzyme in complex with antibiotic rifapentin
Source: Thermus thermophilus. Organism_taxid: 274. Organism_taxid: 274
Chains: A, B, C, D, E, K, L, M, N, O (229 residues) CATH domains: 3.30.1360.10 2.170.120.12
2a6e
Crystal structure of the t. Thermophilus RNA polymerase holoenzyme
Source: Thermus thermophilus. Organism_taxid: 274. Organism_taxid: 274
Chains: A, B, C, D, E, K, L, M, N, O (229 residues) CATH domains: 3.30.1360.10 2.170.120.12
2a6h
Crystal structure of the t. Thermophilus RNA polymerase holoenzyme in complex with antibiotic sterptolydigin
Source: Thermus thermophilus. Organism_taxid: 274. Organism_taxid: 274
Chains: A, B, C, D, E, K, L, M, N, O (229 residues) CATH domains: 3.30.1360.10 2.170.120.12
2auj
Structure of thermus aquaticus RNA polymerase beta'-subunit insert
Source: Thermus aquaticus. Organism_taxid: 271. Gene: rpoc. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Chain: D (298 residues) CATH domains: Unassigned Unassigned Unassigned Unassigned
2auk
Structure of e. Coli RNA polymerase beta' g/g' insert
Source: Escherichia coli. Organism_taxid: 562. Gene: rpoc, tabb. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Chains: A, B, C, D, E (189 residues) CATH domains: 2.40.50.100 2.40.50.100
2b63
Complete RNA polymerase ii-RNA inhibitor complex
Source: Synthetic: yes. Other_details: synthetic oligonucleotide containing four 5- bromo-uridine (5bu) residues. Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Gene: rpb4. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B (1416 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
2b8k
12-subunit RNA polymerase ii
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Organism_taxid: 4932
Chains: A, B (1416 residues)
2be5
Crystal structure of the t. Thermophilus RNA polymerase holoenzyme in complex with inhibitor tagetitoxin
Source: Thermus thermophilus. Organism_taxid: 274. Organism_taxid: 274
Chains: A, B, C, D, E, K, L, M, N, O (229 residues) CATH domains: 3.30.1360.10 2.170.120.12
2cw0
Crystal structure of thermus thermophilus RNA polymerase hol 3.3 angstroms resolution
Source: Thermus thermophilus. Organism_taxid: 274. Organism_taxid: 300852. Strain: hb8. Organism_taxid: 262724. Strain: hb27
Chains: A, B, C, D, E, K, L, M, N, O (229 residues) CATH domains: 3.30.1360.10 2.170.120.12
2e2h
RNA polymerase ii elongation complex at 5 mm mg2+ with gtp
Source: Synthetic: yes. Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: delta-rpb4. Strain: delta-rpb4
Chains: A, B (1398 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
Bound ligand:   Het Group GTP is 63.00% similar to enzyme reactant NTP
2e2i
RNA polymerase ii elongation complex in 5 mm mg+2 with 2'- dgtp
Source: Synthetic: yes. Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: delta-rpb4. Strain: delta-rpb4
Chains: A, B (1411 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
Bound ligand:   Het Group DGT is 60.00% similar to enzyme reactant NTP
2e2j
RNA polymerase ii elongation complex in 5 mm mg+2 with gmpcpp
Source: Synthetic: yes. Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: delta-rpb4. Strain: delta-rpb4
Chains: A, B (1395 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
2gho
Recombinant thermus aquaticus RNA polymerase for structural studies
Source: Thermus aquaticus. Organism_taxid: 271. Gene: rpoa. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008. Gene: rpob. Gene: rpoc.
Chains: A, B, C, D (230 residues)
2ja5
Cpd lesion containing RNA polymerase ii elongation complex a
Source: Saccharomyces cerevisiae. Bakers' yeast. Organism_taxid: 4932. Synthetic: yes. Other_details: synthetic oligonucleotide. Other_details: synthetic oligonucleotide
Chains: A, B (1421 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
2ja6
Cpd lesion containing RNA polymerase ii elongation complex b
Source: Saccharomyces cerevisiae. Bakers' yeast. Organism_taxid: 4932. Synthetic: yes. Other_details: synthetic oligonucleotide. Other_details: synthetic oligonucleotide
Chains: A, B (1421 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
2ja7
Cpd lesion containing RNA polymerase ii elongation complex c
Source: Saccharomyces cerevisiae. Bakers' yeast. Organism_taxid: 4932. Synthetic: yes. Other_details: synthetic oligonucleotide. Other_details: synthetic oligonucleotide
Chains: A, B, M, N (1421 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
2ja8
Cpd lesion containing RNA polymerase ii elongation complex d
Source: Saccharomyces cerevisiae. Bakers' yeast. Organism_taxid: 4932. Synthetic: yes. Other_details: synthetic oligonucleotide. Other_details: synthetic oligonucleotide
Chains: A, B (1421 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
2jzb
Solution structure of the complex between e.Coli nusa-ar2 and rnap-actd
Source: Yersinia pseudotuberculosis. Organism_taxid: 633. Gene: rpoa. Expressed in: escherichia coli. Expression_system_taxid: 562. Escherichia coli. Organism_taxid: 562. Gene: nusa.
Chain: A (81 residues) CATH domain: 1.10.150.20
2lmc
Structure of t7 transcription factor gp2-e. Coli rnap jaw do complex
Source: Enterobacteria phage t7. Organism_taxid: 10760. Gene: 2, gp2. Expressed in: escherichia coli. Expression_system_taxid: 562. Escherichia coli k-12. Organism_taxid: 83333. Strain: k12. Gene: b3988, jw3951, rnap, rpoc, tabb.
Chain: B (61 residues) CATH domain: 2.40.50.100
2lo6
Structure of nrd1 cid bound to phosphorylated rnap ii ctd
Source: Saccharomyces cerevisiae s288c. Baker's yeast. Organism_taxid: 559292. Strain: atcc 204508 / s288c. Gene: nrd1, ynl251c, n0868. Expressed in: escherichia coli. Expression_system_taxid: 562. Synthetic: yes. Organism_taxid: 559292
Chain: B (14 residues)
2lto
Tdrd3 complex
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: tdrd3. Expressed in: escherichia coli. Expression_system_taxid: 562. Synthetic: yes. Organism_taxid: 9606
Chain: B (13 residues)
2ly7
B-flap domain of RNA polymerase (b. Subtilis)
Source: Bacillus subtilis. Organism_taxid: 224308. Strain: 168. Gene: rpob, crse, rfm, bsu01070. Expressed in: escherichia coli. Expression_system_taxid: 511693.
Chain: A (139 residues)
2max
Nmr structure of the RNA polymerase alpha subunit c-terminal from helicobacter pylori
Source: Helicobacter pylori. Organism_taxid: 85963. Strain: j99. Gene: jhp_1213, rpoa. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chain: A (114 residues) CATH domain: Unassigned
2nvq
RNA polymerase ii elongation complex in 150 mm mg+2 with 2'dutp
Source: Synthetic: yes. Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: cb010 delta rpb4. Strain: cb010 delta rpb4
Chains: A, B (1405 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
Bound ligand:   Het Group DUT is 66.00% similar to enzyme reactant NTP
2nvs
RNA polymerase ii elongation complex in 150 mm mg+2 with utp
Source: Saccharomyces cerevisiae. Yeast. Strain: delta-rpb4. Synthetic: yes. Synthetic: yes
Chains: A, B, C, E, F, H, I, J, K, L (1411 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
Bound ligand:   Het Group UTP is 70.00% similar to enzyme reactant nucleoside triphosphate
2nvt
RNA polymerase ii elongation complex in 150 mm mg+2 with gmpcpp
Source: Synthetic: yes. Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: delta-rpb4. Strain: delta-rpb4
Chains: A, B (1411 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
2nvx
RNA polymerase ii elongation complex in 5 mm mg+2 with 2'- dutp
Source: Synthetic: yes. Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: delta-rpb4. Strain: delta-rpb4
Chains: A, B (1402 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
Bound ligand:   Het Group DUT is 66.00% similar to enzyme reactant NTP
2nvy
RNA polymerase ii form ii in 150 mm mn+2
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: delta-rpb4. Strain: delta-rpb4
Chains: A, B (1419 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
2nvz
RNA polymerase ii elongation complex with utp, updated 11/2006
Source: Synthetic: yes. Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: delta-rpb4. Strain: delta-rpb4
Chains: A, B (1398 residues)
Bound ligand:   Het Group UTP is 70.00% similar to enzyme reactant NTP
2o5i
Crystal structure of the t. Thermophilus RNA polymerase elon complex
Source: Synthetic: yes. Thermus thermophilus. Organism_taxid: 300852. Strain: hb8. Strain: hb8
Chains: A, B, C, D, E, K, L, M, N, O (229 residues) CATH domains: 3.30.1360.10 2.170.120.12
2o5j
Crystal structure of the t. Thermophilus rnap polymerase elo complex with the ntp substrate analog
Source: Synthetic: yes. Thermus thermophilus. Organism_taxid: 300852. Strain: hb8. Strain: hb8
Chains: A, B, C, D, E, K, L, M, N, O (229 residues) CATH domains: 3.30.1360.10 2.170.120.12
2pa8
X-ray crystal structure of the d/l subcomplex of the sulfolo solfataricus RNA polymerase
Source: Sulfolobus solfataricus. Organism_taxid: 273057. Strain: p2. Gene: rpod. Expressed in: escherichia coli. Expression_system_taxid: 562. Gene: rpol.
Chains: D, L (264 residues) CATH domains: 3.30.1360.10 2.170.120.12 3.30.70.20
2pi4
T7rnap complexed with a phi10 protein and initiating gtps.
Source: Synthetic: yes. Enterobacteria phage t7. Organism_taxid: 10760. Gene: 1. Expressed in: escherichia coli. Expression_system_taxid: 562
Chain: A (862 residues) CATH domains: 1.10.1320.10 1.10.287.260 3.30.70.370 1.10.287.280 1.10.150.20
Bound ligand:   Het Group GH3 is 60.00% similar to enzyme reactant NTP
2pi5
T7 RNA polymerase complexed with a phi10 promoter
Source: Synthetic: yes. Enterobacteria phage t7. Organism_taxid: 10760. Expressed in: escherichia coli. Expression_system_taxid: 562
Chain: A (862 residues) CATH domains: 1.10.1320.10 1.10.287.260 3.30.70.370 1.10.287.280 1.10.150.20
2pmz
Archaeal RNA polymerase from sulfolobus solfataricus
Source: Sulfolobus solfataricus. Organism_taxid: 273057. Strain: p2. Strain: p2
Chains: A, C, B, D, E, H, K, L, N, P, Q, G, R, S, T, V, W, X, Y, Z (776 residues) CATH domains: Unassigned 2.40.40.20 3.30.1490.180
2ppb
Crystal structure of the t. Thermophilus rnap polymerase elo complex with the ntp substrate analog and antibiotic strept
Source: Synthetic: yes. Thermus thermophilus. Organism_taxid: 300852. Strain: hb8. Strain: hb8
Chains: A, B, C, D, E, K, L, M, N, O (229 residues) CATH domains: 3.30.1360.10 2.170.120.12
2r7z
Cisplatin lesion containing RNA polymerase ii elongation com
Source: Synthetic: yes. Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Organism_taxid: 4932
Chains: A, B (1416 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
2r92
Elongation complex of RNA polymerase ii with artificial rdrp scaffold
Source: Synthetic: yes. Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Organism_taxid: 4932
Chains: A, B (1422 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
2r93
Elongation complex of RNA polymerase ii with a hepatitis delta virus-derived RNA stem loop
Source: Synthetic: yes. Other_details: this sequence occurs naturally in hepatitis delta virus.. Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Organism_taxid: 4932
Chains: A, B (1422 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
2vum
Alpha-amanitin inhibited complete RNA polymerase ii elongation complex
Source: Saccharomyces cerevisiae. Bakers' yeast. Organism_taxid: 4932. Amanita phalloides. Death cap. Organism_taxid: 67723. Synthetic: yes. Other_details: synthetic oligonucleotide. Other_details: synthetic oligonucleotide
Chains: A, B (1418 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
2waq
The complete structure of the archaeal 13-subunit DNA- directed RNA polymerase
Source: Sulfolobus shibatae. Organism_taxid: 2286. Organism_taxid: 2286
Chains: A, B, D, H, L, N (841 residues) CATH domains: Unassigned 2.40.40.20 3.30.1490.180
2wb1
The complete structure of the archaeal 13-subunit DNA- directed RNA polymerase
Source: Sulfolobus shibatae. Organism_taxid: 2286. Organism_taxid: 2286
Chains: A, B, D, H, L, M, N, O, R, S, W, Z (841 residues) CATH domains: Unassigned 2.40.40.20 3.30.1490.180
2y0s
Crystal structure of sulfolobus shibatae RNA polymerase in p21 space group
Source: Sulfolobus shibatae. Organism_taxid: 2286. Organism_taxid: 2286
Chains: A, B, C, D, H, I, K, L, M, N, O, P, R, S, W, X, Y, Z (831 residues) CATH domains: Unassigned 2.40.40.20 3.30.1490.180
2yu9
RNA polymerase ii elongation complex in 150 mm mg+2 with utp
Source: Synthetic: yes. Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: delta-rpb4. Strain: delta-rpb4
Chains: A, B (1411 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
Bound ligand:   Het Group UTP is 70.00% similar to enzyme reactant NTP
3aoh
RNA polymerase-gfh1 complex (crystal type 1)
Source: Thermus thermophilus. Organism_taxid: 300852. Strain: hb8. Synthetic: yes. Other_details: DNA oligomer. Other_details: RNA oligomer. Gene: ttha1042. Expressed in: escherichia coli. Expression_system_taxid: 562
Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O (223 residues)
3aoi
RNA polymerase-gfh1 complex (crystal type 2)
Source: Thermus thermophilus. Organism_taxid: 300852. Strain: hb8. Synthetic: yes. Other_details: DNA oligomer. Other_details: RNA oligomer. Gene: ttha1042. Expressed in: escherichia coli. Expression_system_taxid: 562
Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O (223 residues)
3cqz
Crystal structure of 10 subunit RNA polymerase ii in complex inhibitor alpha-amanitin
Source: Saccharomyces cerevisiae. Brewer's yeast, lager beer yeast, yeast. Organism_taxid: 4932. Synthetic: yes. Amanita phalloides. Organism_taxid: 67723
Chains: A, B (1349 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
3d9l
Snapshots of the RNA processing factor scaf8 bound to differ phosphorylated forms of the carboxy-terminal domain of RNA- ii
Source: Homo sapiens. Man. Organism_taxid: 9606. Gene: rbm16, kiaa1116. Expressed in: escherichia coli. Expression_system_taxid: 562. Synthetic: yes. Other_details: peptide derived from the conserved repeat se RNA polymerase ii ctd
Chain: Y (11 residues)
3dxj
Crystal structure of thermus thermophilus RNA polymerase holoenzyme in complex with the antibiotic myxopyronin
Source: Thermus thermophilus hb8. Organism_taxid: 300852. Organism_taxid: 300852
Chains: A, B, C, D, E, K, L, M, N, O (231 residues) CATH domains: 3.30.1360.10 2.170.120.12
Bound ligand:   Het Group PO4 is 55.00% similar to enzyme product diphosphate
3e2e
Crystal structure of an intermediate complex of t7 rnap and
Source: Bacteriophage t7. Gene: 1. Expressed in: escherichia coli. Expression_system_taxid: 562. Synthetic: yes. Synthetic: yes
Chain: A (832 residues) CATH domains: 1.10.1320.10 1.10.287.260 3.30.70.370 1.10.287.280 1.10.150.20
3e3j
Crystal structure of an intermediate complex of t7 rnap and 8nt of RNA
Source: Bacteriophage t7. Gene: 1. Expressed in: escherichia coli. Expression_system_taxid: 562. Synthetic: yes. Synthetic: yes
Chains: C, B (833 residues)
3e7h
The crystal structure of the beta subunit of the DNA- directed RNA polymerase from vibrio cholerae o1 biovar eltor
Source: Vibrio cholerae. Organism_taxid: 666. Strain: str. N16961 chromosome i. Gene: rpob, vc_0328. Expressed in: escherichia coli.
Chains: A, B (102 residues)
3eql
Crystal structure of the t. Thermophilus RNA polymerase holoenzyme in complex with antibiotic myxopyronin
Source: Thermus thermophilus. Organism_taxid: 274. Organism_taxid: 274
Chains: A, B, C, D, E, K, L, M, N, O (229 residues) CATH domains: 3.30.1360.10 2.170.120.12
3fki
12-subunit RNA polymerase ii refined with zn-sad data
Source: Saccharomyces cerevisiae. Yeast. Organism_taxid: 4932. Organism_taxid: 4932
Chains: A, B (1427 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
3gfk
Crystal structure of bacillus subtilis spx/RNA polymerase alpha subunit c-terminal domain complex
Source: Bacillus subtilis. Organism_taxid: 1423. Gene: spxa, bsu11500. Expressed in: escherichia coli. Expression_system_taxid: 562. Gene: rpoa, bsu01430. Expression_system_taxid: 562
Chain: B (76 residues) CATH domain: 1.10.150.20
3gtg
Backtracked RNA polymerase ii complex with 12mer RNA
Source: Saccharomyces cerevisiae. Yeast. Organism_taxid: 4932. Synthetic: yes. Other_details: synthetic RNA. Other_details: synthetic template DNA. Other_details: synthetic non-template DNA
Chains: A, B (1442 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
3gtj
Backtracked RNA polymerase ii complex with 13mer RNA
Source: Saccharomyces cerevisiae. Yeast. Organism_taxid: 4932. Synthetic: yes. Other_details: synthetic RNA. Other_details: synthetic template DNA. Other_details: synthetic non-template DNA
Chains: A, B (1429 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
3gtk
Backtracked RNA polymerase ii complex with 18mer RNA
Source: Saccharomyces cerevisiae. Yeast. Organism_taxid: 4932. Synthetic: yes. Other_details: synthetic RNA. Other_details: synthetic template DNA. Other_details: synthetic non-template DNA
Chains: A, B (1442 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
3gtl
Backtracked RNA polymerase ii complex with 13mer with g<>u m
Source: Saccharomyces cerevisiae. Yeast. Organism_taxid: 4932. Synthetic: yes. Other_details: synthetic RNA. Other_details: synthetic template DNA. Other_details: synthetic non-template DNA
Chains: A, B (1395 residues)
3gtm
Co-complex of backtracked RNA polymerase ii with tfiis
Source: Saccharomyces cerevisiae. Yeast. Organism_taxid: 4932. Gene: dst1, ppr2, ygl043w. Expressed in: escherichia coli. Expression_system_taxid: 562. Synthetic: yes. Other_details: synthetic RNA. Other_details: synthetic template DNA.
Chains: A, B (1426 residues)
3gto
Backtracked RNA polymerase ii complex with 15mer RNA
Source: Saccharomyces cerevisiae. Yeast. Organism_taxid: 4932. Synthetic: yes. Other_details: synthetic RNA. Other_details: synthetic template DNA. Other_details: synthetic non-template DNA
Chains: A, B (1395 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
3gtp
Backtracked RNA polymerase ii complex with 24mer RNA
Source: Saccharomyces cerevisiae. Yeast. Organism_taxid: 4932. Synthetic: yes. Other_details: synthetic RNA. Other_details: synthetic template DNA. Other_details: synthetic non-template DNA
Chains: A, B (1395 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
3gtq
Backtracked RNA polymerase ii complex induced by damage
Source: Saccharomyces cerevisiae. Yeast. Organism_taxid: 4932. Synthetic: yes. Other_details: synthetic RNA. Other_details: synthetic template DNA
Chains: A, B (1395 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
3h0g
RNA polymerase ii from schizosaccharomyces pombe
Source: Schizosaccharomyces pombe. Organism_taxid: 284812. Strain: 972h-. Strain: 972h-
Chains: A, B, M, N (1496 residues) CATH domains: Unassigned 2.40.40.20 3.30.1490.180
3h3v
Yeast rnap ii containing poly(a)-signal sequence in the acti
Source: Saccharomyces cerevisiae. Yeast. Organism_taxid: 4932. Synthetic: yes. Synthetic: yes
Chains: B, C (1416 residues)
3hkz
The x-ray crystal structure of RNA polymerase from archaea
Source: Sulfolobus solfataricus. Organism_taxid: 273057. Strain: p2. Strain: p2
Chains: A, C, B, D, E, G, H, K, L, N, P, I, M, J, O, Q, S, T, U, V, W, X (836 residues) CATH domains: Unassigned 2.40.40.20 3.30.1490.180
3hou
Complete RNA polymerase ii elongation complex i with a t-u mismatch
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Synthetic: yes. Synthetic: yes
Chains: A, B, M, N (1416 residues)
3hov
Complete RNA polymerase ii elongation complex ii
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Synthetic: yes. Synthetic: yes
Chains: A, B (1416 residues)
3how
Complete RNA polymerase ii elongation complex iii with a t-u mismatch and a frayed RNA 3'-uridine
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Synthetic: yes. Synthetic: yes
Chains: A, B (1416 residues)
3hox
Complete RNA polymerase ii elongation complex v
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Synthetic: yes. Synthetic: yes
Chains: A, B (1417 residues)
3hoy
Complete RNA polymerase ii elongation complex vi
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Synthetic: yes. Synthetic: yes
Chains: A, B (1419 residues)
3hoz
Complete RNA polymerase ii elongation complex iv with a t-u mismatch and a frayed RNA 3'-guanine
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Synthetic: yes. Synthetic: yes
Chains: A, B (1418 residues)
3i4m
8-oxoguanine containing RNA polymerase ii elongation complex
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Synthetic: yes. Synthetic: yes
Chains: A, B (1429 residues)
3i4n
8-oxoguanine containing RNA polymerase ii elongation complex
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Synthetic: yes. Synthetic: yes
Chains: A, B (1429 residues)
3ihq
Crystal structure of reduced c10s spx in complex with the alpha c-terminal domain of RNA polymeras
Source: Bacillus subtilis. Organism_taxid: 1423. Gene: bsu11500, spxa. Expressed in: escherichia coli. Expression_system_taxid: 562. Gene: bsu01430, rpoa.
Chain: B (67 residues) CATH domain: 1.10.150.20
3iyd
Three-dimensional em structure of an intact activator-depend transcription initiation complex
Source: Escherichia coli. Organism_taxid: 83333. Strain: k-12. Gene: b3295, jw3257, pez, phs, rpoa, rpob, rpoc, rpod, rpoz expressed in: escherichia coli. Expression_system_taxid: 562. Gene: rpob, gron, nitb, rif, ron, stl, stv, tabd, b3987, jw synthetic: yes. Other_details: purchased from idt and annealed.
Chains: A, B, C, D, E (322 residues)
3j0k
Orientation of RNA polymerase ii within the human vp16-media ii-tfiif assembly
Source: Homo sapiens. Human. Organism_taxid: 9606. Cell_line: hela. Organelle: nucleus. Organelle: nucleus
Chains: A, B (1426 residues)
3j1n
Cryo-em map of a yeast minimal preinitiation complex interac the mediator head module
Source: Saccharomyces cerevisiae. Yeast. Organism_taxid: 4932. Organism_taxid: 4932
Chains: A, B (1412 residues)
3k1f
Crystal structure of RNA polymerase ii in complex with tfiib
Source: Saccharomyces cerevisiae. Yeast. Organism_taxid: 4932. Organism_taxid: 4932
Chains: A, B (1416 residues)
3k4g
Crystal structure of e. Coli RNA polymerase alpha subunit c- domain
Source: Escherichia coli k-12. Organism_taxid: 83333. Strain: k12. Gene: b3295, jw3257, pez, phs, rpoa, sez. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C, D, E, F, G, H (84 residues) CATH domain: 1.10.150.20
3k7a
Crystal structure of an RNA polymerase ii-tfiib complex
Source: Saccharomyces cerevisiae. Yeast. Organism_taxid: 4932. Gene: d2150, rpb1, rpb220, rpo21, sua8, ydl140c. Expressed in: saccharomyces cerevisiae. Expression_system_taxid: 4932. Gene: rpb150, rpb2, rpo22, yor151c. Gene: rpb3, yil021w. Gene: rpa7, rpb5, rpc9, ybr1204, ybr154c.
Chains: A, B (1408 residues)
3lti
Crystal structure of the escherichia coli RNA polymerase bet beta2-betai4 domains
Source: Escherichia coli. Organism_taxid: 83333. Strain: k12. Gene: b3987, gron, jw3950, nitb, rif, ron, rpob, stl, stv, expressed in: escherichia coli. Expression_system_taxid: 562.
Chain: A (284 residues) CATH domain: 3.90.1110.10
3lu0
Molecular model of escherichia coli core RNA polymerase
Source: Escherichia coli. Organism_taxid: 83333. Strain: k12. Gene: b3295, jw3257, pez, phs, rpoa, sez. Expressed in: escherichia coli. Expression_system_taxid: 562. Gene: b3987, gron, jw3950, nitb, rif, ron, rpob, rpoc, stl, tabd. Gene: b3988, jw3951, rpoc, rpod, tabb.
Chains: A, B, C, D, E (235 residues)
3m3y
RNA polymerase ii elongation complex c
Source: Saccharomyces cerevisiae. Brewer's yeast,lager beer yeast,yeast. Organism_taxid: 4932. Synthetic: yes. Synthetic: yes
Chains: A, B (1395 residues)
3m4o
RNA polymerase ii elongation complex b
Source: Saccharomyces cerevisiae. Brewer's yeast,lager beer yeast,yeast. Organism_taxid: 4932. Synthetic: yes. Synthetic: yes
Chains: A, B (1395 residues)
3mlq
Crystal structure of the thermus thermophilus transcription- coupling factor RNA polymerase interacting domain with the aquaticus RNA polymerase beta1 domain
Source: Thermus aquaticus. Organism_taxid: 271. Gene: rpob. Expressed in: escherichia coli. Expression_system_taxid: 562. Thermus thermophilus. Organism_taxid: 262724. Strain: hb27. Gene: mfd, tt_c0533.
Chains: A, B, C, D (186 residues) CATH domain: Unassigned
Bound ligand:   Het Group PO4 is 55.00% similar to enzyme product diphosphate
3n4m
E. Coli RNA polymerase alpha subunit c-terminal domain in co cap and DNA
Source: Escherichia coli. Organism_taxid: 83333. Strain: k12. Gene: b3357, cap, crp, csm, jw5702. Expressed in: escherichia coli. Expression_system_taxid: 562. Gene: b3295, jw3257, pez, phs, rpoa, sez. Synthetic: yes. Synthetic: yes
Chains: B, C (74 residues) CATH domain: 1.10.150.20
3n97
RNA polymerase alpha c-terminal domain (e. Coli) and sigma r (t. Aq. Mutant) bound to (up,-35 element) DNA
Source: Thermus aquaticus. Organism_taxid: 271. Gene: rpos. Expressed in: escherichia coli. Expression_system_taxid: 562. Escherichia coli. Organism_taxid: 83333. Strain: k12. Gene: b3295, jw3257, pez, phs, rpoa, sez.
Chains: B, C (75 residues) CATH domain: 1.10.150.20
3po2
Arrested RNA polymerase ii elongation complex
Source: Saccharomyces cerevisiae. Brewer's yeast,lager beer yeast,yeast. Organism_taxid: 4932. Synthetic: yes. Other_details: chemically synthesised. Other_details: enzymatically synthesised. Other_details: chemically synthesised
Chains: A, B (1421 residues)
3po3
Arrested RNA polymerase ii reactivation intermediate
Source: Saccharomyces cerevisiae. Brewer's yeast,lager beer yeast,yeast. Organism_taxid: 4932. Synthetic: yes. Other_details: chemically synthesised. Other_details: enzymatically synthesised. Gene: dst1, ppr2, ygl043w. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B (1426 residues)
3qqc
Crystal structure of archaeal spt4/5 bound to the rnap clamp
Source: Pyrococcus furiosus. Organism_taxid: 2261. Gene: pf1563. Expressed in: escherichia coli. Expression_system_taxid: 562. Gene: pf1990. Gene: pf0255. Expression_system_taxid: 562
Chain: A (381 residues) CATH domain: Unassigned
3qt1
RNA polymerase ii variant containing a chimeric rpb9-c11 sub
Source: Saccharomyces cerevisiae. Yeast. Organism_taxid: 4932. Saccharomyces cerevisiae, saccharomyce cerevisiae. Yeast, yeast. Organism_taxid: 4932, 4932. Gene: rpb9, ygl070c. Expressed in: escherichia coli.
Chains: A, B (1416 residues)
3rnp
Bacteriophage t7 RNA polymerase, high salt crystal form, low low temperature data
Source: Bacteriophage t7. Expressed in: escherichia coli.
Chains: A, B, C (780 residues)
3rzd
RNA polymerase ii initiation complex with a 5-nt RNA
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 559292. Strain: cb010. Synthetic: yes. Synthetic: yes
Chains: A, B (1405 residues)
3rzo
RNA polymerase ii initiation complex with a 4-nt RNA
Source: Saccharomyces cerevisiae s288c. Baker's yeast. Organism_taxid: 559292. Strain: cb010. Synthetic: yes. Synthetic: yes
Chains: A, B (1405 residues)
3s14
RNA polymerase ii initiation complex with a 6-nt RNA
Source: Saccharomyces cerevisiae s288c. Baker's yeast. Organism_taxid: 559292. Strain: cb010. Synthetic: yes. Synthetic: yes
Chains: A, B (1405 residues)
3s15
RNA polymerase ii initiation complex with a 7-nt RNA
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: cb010. Synthetic: yes. Synthetic: yes
Chains: A, B (1405 residues)
3s16
RNA polymerase ii initiation complex with an 8-nt RNA
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: cb010. Synthetic: yes. Synthetic: yes
Chains: A, B (1405 residues)
3s17
RNA polymerase ii initiation complex with a 9-nt RNA
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: cb010. Synthetic: yes. Synthetic: yes
Chains: A, B (1405 residues)
3s1m
RNA polymerase ii initiation complex with a 5-nt RNA (varian
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: cb010. Synthetic: yes. Synthetic: yes
Chains: A, B (1405 residues)
3s1n
RNA polymerase ii initiation complex with a 5-nt RNA (varian
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: cb010. Synthetic: yes. Synthetic: yes
Chains: A, B (1405 residues)
3s1q
RNA polymerase ii initiation complex with a 5-nt 3'-deoxy rn with atp
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: cb010. Synthetic: yes. Synthetic: yes
Chains: A, B (1405 residues)
Bound ligand:   Het Group ATP is 65.62% similar to enzyme reactant NTP
3s1r
RNA polymerase ii initiation complex with a 5-nt 3'-deoxy rn with gtp
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: cb010. Synthetic: yes. Synthetic: yes
Chains: A, B (1405 residues)
Bound ligand:   Het Group GTP is 63.64% similar to enzyme reactant NTP
3s2d
RNA polymerase ii initiation complex with a 5-nt RNA contain u
Source: Saccharomyces cerevisiae s288c. Baker's yeast. Organism_taxid: 559292. Strain: cb010. Synthetic: yes. Synthetic: yes
Chains: A, B (1405 residues)
3s2h
RNA polymerase ii initiation complex with a 6-nt RNA contain 2[prime]-iodo atp
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 559292. Strain: cb010. Synthetic: yes. Synthetic: yes
Chains: A, B (1405 residues)
3spa
Crystal structure of human mitochondrial RNA polymerase
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: aac06147.1, polrmt. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chain: A (941 residues) CATH domain: Unassigned
3t72
Phob(e)-sigma70(4)-(rnap-betha-flap-tip-helix)-DNA transcrip activation sub-complex
Source: Escherichia coli. Organism_taxid: 83333. Strain: k12. Gene: phob, b0399, jw0389. Expressed in: escherichia coli. Expression_system_taxid: 562. Synthetic: yes. Organism_taxid: 562. Other_details: synthesized DNA.
Chains: q, o (93 residues)
3tbi
Crystal structure of t4 gp33 bound to e. Coli rnap beta-flap
Source: Enterobacteria phage t4. Organism_taxid: 10665. Gene: 33, gp33. Expressed in: escherichia coli. Expression_system_taxid: 469008. Escherichia coli. Organism_taxid: 562. Gene: b3987, gron, jw3950, nitb, rif, ron, rpob, stl, stv,
Chain: B (228 residues) CATH domain: 2.40.50.150
3wod
RNA polymerase-gp39 complex
Source: Thermus thermophilus. Organism_taxid: 300852. Strain: hb8. Thermus phage p23-45. Organism_taxid: 466051. Gene: gp39, p23p39. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C, D, E (225 residues) CATH domains: 3.30.1360.10 2.170.120.12
3woe
Crystal structure of p23-45 gp39 (6-109) bound to thermus th RNA polymerase beta-flap domain
Source: Thermus thermophilus. Organism_taxid: 300852. Strain: hb8. Gene: rpob, ttha1813. Expressed in: escherichia coli. Expression_system_taxid: 562. Thermus phage p23-45. Organism_taxid: 466051. Strain: thermus phage p23-45.
Chains: A, C (130 residues)
3wof
Crystal structure of p23-45 gp39 (6-132) bound to thermus th RNA polymerase beta-flap domain
Source: Thermus thermophilus. Organism_taxid: 300852. Strain: hb8. Gene: rpob, ttha1813. Expressed in: escherichia coli. Expression_system_taxid: 562. Thermus phage p23-45. Organism_taxid: 466051. Strain: thermus phage p23-45.
Chains: A, C, E, G, I, K, M, O, Q, S, U, W (129 residues)
4a3b
RNA polymerase ii initial transcribing complex with a 4nt DNA-RNA hybrid
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Synthetic: yes. Organism_taxid: 4932
Chains: A, B (1422 residues)
4a3c
RNA polymerase ii initial transcribing complex with a 5nt dn hybrid
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Synthetic: yes. Organism_taxid: 4932
Chains: A, B (1422 residues)
4a3d
RNA polymerase ii initial transcribing complex with a 6nt dn hybrid
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Synthetic: yes. Organism_taxid: 4932
Chains: A, B (1422 residues)
4a3e
RNA polymerase ii initial transcribing complex with a 5nt dn hybrid and soaked with ampcpp
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Synthetic: yes. Organism_taxid: 4932
Chains: A, B (1423 residues)
4a3f
RNA polymerase ii initial transcribing complex with a 6nt dn hybrid and soaked with ampcpp
Source: Saccharomyces cerevisiae. Baker's yeast. Synthetic: yes. Baker's yeast
Chains: A, B (1425 residues)
4a3g
RNA polymerase ii initial transcribing complex with a 2nt DNA-RNA hybrid
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Synthetic: yes. Organism_taxid: 4932
Chains: A, B (1422 residues)
4a3i
RNA polymerase ii binary complex with DNA
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Synthetic: yes. Synthetic construct. Organism_taxid: 32630. Organism_taxid: 32630
Chains: A, B (1422 residues)
4a3j
RNA polymerase ii initial transcribing complex with a 2nt DNA-RNA hybrid and soaked with gmpcpp
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Synthetic: yes. Synthetic construct. Organism_taxid: 32630. Organism_taxid: 32630
Chains: A, B (1425 residues)
Bound ligand:   Het Group C is 40.00% similar to enzyme reactant NTP
4a3k
RNA polymerase ii initial transcribing complex with a 7nt DNA-RNA hybrid
Source: Saccharomyces cerevisiae. Baker's yeast. Synthetic: yes. Synthetic construct. Synthetic construct
Chains: A, B (1422 residues)
4a3l
RNA polymerase ii initial transcribing complex with a 7nt DNA-RNA hybrid and soaked with ampcpp
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Synthetic: yes. Organism_taxid: 4932
Chains: A, B (1425 residues)
4a3m
RNA polymerase ii initial transcribing complex with a 4nt DNA-RNA hybrid and soaked with ampcpp
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Synthetic: yes. Organism_taxid: 4932
Chains: A, B (1425 residues)
4a93
RNA polymerase ii elongation complex containing a cpd lesion
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Synthetic: yes. Organism_taxid: 4932
Chains: A, B (1422 residues)
4ayb
Rnap at 3.2ang
Source: Sulfolobus shibatae. Archaea. Organism_taxid: 2286. Organism_taxid: 2286
Chains: A, B, C, D, H, K, L, N, P (872 residues) CATH domains: Unassigned 2.40.40.20 3.30.1490.180
4b1o
Archaeal rnap-DNA binary complex at 4.32ang
Source: Sulfolobus shibatae b12. Organism_taxid: 523848. Synthetic: yes. Synthetic construct. Organism_taxid: 32630. Organism_taxid: 32630
Chains: A, B, C, D, H, K, L, N, P (872 residues)
4b1p
Archaeal rnap-DNA binary complex at 4.32ang
Source: Synthetic: yes. Synthetic construct. Organism_taxid: 32630. Sulfolobus shibatae b12. Organism_taxid: 523848. Organism_taxid: 523848
Chains: I, M, O, R, S, W, X, Y, Z (84 residues)
4bbr
Structure of RNA polymerase ii-tfiib complex
Source: Saccharomyces cerevisiae. Organism_taxid: 4932. Expressed in: escherichia coli. Expression_system_taxid: 562
Chains: A, B (1414 residues)
4bbs
Structure of an initially transcribing RNA polymerase ii- tfiib complex
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Expressed in: escherichia coli. Expression_system_taxid: 562. Synthetic: yes. Organism_taxid: 4932
Chains: A, B (1419 residues)
4boc
Structure of mitochondrial RNA polymerase elongation complex
Source: Homo sapiens. Human. Organism_taxid: 9606. Expressed in: escherichia coli. Expression_system_taxid: 562. Synthetic: yes. Synthetic construct. Organism_taxid: 32630. Organism_taxid: 32630
Chain: A (989 residues) CATH domain: Unassigned
4bxx
Arrested RNA polymerase ii-bye1 complex
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Synthetic: yes. Synthetic construct. Organism_taxid: 32630. Other_details: enzymatically synthesized. Expressed in: escherichia coli. Expression_system_taxid: 469008.
Chains: A, B (1429 residues)
4bxz
RNA polymerase ii-bye1 complex
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Expressed in: escherichia coli. Expression_system_taxid: 469008. Expression_system_variant: ril.
Chains: A, B (1416 residues)
4by1
Elongating RNA polymerase ii-bye1 tld complex soaked with am
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Synthetic: yes. Synthetic construct. Organism_taxid: 32630. Expressed in: escherichia coli. Expression_system_taxid: 469008. Expression_system_variant: ril.
Chains: A, B (1427 residues)
4by7
Elongating RNA polymerase ii-bye1 tld complex
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Synthetic: yes. Synthetic construct. Organism_taxid: 32630. Expressed in: escherichia coli. Expression_system_taxid: 469008. Expression_system_variant: ril.
Chains: A, B (1426 residues)
4c2m
Structure of RNA polymerase i at 2.8 a resolution
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: cb010. Strain: cb010
Chains: A, B, P, Q (1521 residues) CATH domains: Unassigned Unassigned 2.40.40.20 3.30.1490.180
4c3h
Structure of 14-subunit RNA polymerase i at 3.27 a resolutio crystal form c2-93
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: sc1613. Other_details: strain sc1613, alias ypr110c, provided by ce ag in heidelberg, germany, modified to express endogenous fused with a c-terminal tap-tag.. Fused with a c-terminal tap-tag.
Chains: A, B (1523 residues)
4c3i
Structure of 14-subunit RNA polymerase i at 3.0 a resolution crystal form c2-100
Source: Saccharomyces cerevisiae. Baker's yeast. Strain: sc1613. Other_details: strain sc1613, alias ypr110c, provided by ce ag in heidelberg, germany, modified to express endogenous fused with a c-terminal tap-tag.. Fused with a c-terminal tap-tag.
Chains: A, B (1484 residues)
4c3j
Structure of 14-subunit RNA polymerase i at 3.35 a resolutio crystal form c2-90
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 4932. Strain: sc1613. Other_details: strain sc1613, alias ypr110c, provided by ce ag in heidelberg, germany, modified to express endogenous fused with a c-terminal tap-tag.. Fused with a c-terminal tap-tag.
Chains: A, B (1523 residues)
4g7h
Crystal structure of thermus thermophilus transcription init complex
Source: Thermus thermophilus. Organism_taxid: 300852. Strain: hb8. Gene: rpod, ttha0532. Expressed in: escherichia coli. Expression_system_taxid: 469008. Synthetic: yes. Synthetic: yes
Chains: A, B, C, D, E, K, L, M, N, O (226 residues) CATH domains: 3.30.1360.10 2.170.120.12
4g7o
Crystal structure of thermus thermophilus transcription init complex containing 2 nt of RNA
Source: Thermus thermophilus. Organism_taxid: 300852. Strain: hb8. Gene: rpod, ttha0532. Expressed in: escherichia coli. Expression_system_taxid: 469008. Synthetic: yes. Synthetic: yes
Chains: A, B, C, D, E, K, L, M, N, O (226 residues) CATH domains: 3.30.1360.10 2.170.120.12
4g7z
Crystal structure of thermus thermophilus transcription init complex containing 5-bru at template-strand position +1
Source: Thermus thermophilus. Organism_taxid: 300852. Strain: hb8. Gene: rpod, ttha0532. Expressed in: escherichia coli. Expression_system_taxid: 469008. Synthetic: yes. Synthetic: yes
Chains: A, B, C, D, E, K, L, M, N, O (226 residues) CATH domains: 3.30.1360.10 2.170.120.12
4gwq
Structure of the mediator head module from s. Cerevisiae in with the carboxy-terminal domain (ctd) of RNA polymerase ii subunit
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 559292. Strain: atcc 204508 / s288c. Saccharomyces cerevisiae s288c. Synthetic: yes. Organism_taxid: 559292
Chain: H (25 residues)
4gzy
Crystal structures of bacterial RNA polymerase paused elonga complexes
Source: Thermus thermophilus. Organism_taxid: 300852. Strain: hb8. Gene: rpoa, ttha1664. Expressed in: thermus thermophilus. Expression_system_taxid: 274. Gene: rpob, ttha1813. Gene: rpoc, ttha1812. Gene: rpoz, ttha1561.
Chains: A, B, C, D, E (223 residues) CATH domains: 3.30.1360.10 2.170.120.12
4gzz
Crystal structures of bacterial RNA polymerase paused elonga complexes
Source: Thermus thermophilus. Organism_taxid: 300852. Strain: hb8. Gene: rpoa, ttha1664. Expressed in: thermus thermophilus. Expression_system_taxid: 274. Gene: rpob, ttha1813. Gene: rpoc, ttha1812. Gene: rpoz, ttha1561.
Chains: A, B, C, D, E (223 residues)
4igc
X-ray crystal structure of escherichia coli sigma70 holoenzy
Source: Escherichia coli. Organism_taxid: 83333. Strain: k12. Gene: rpoa, pez, phs, sez, b3295, jw3257. Expressed in: escherichia coli. Expression_system_taxid: 562. Gene: rpob, gron, nitb, rif, ron, stl, stv, tabd, b3987, jw gene: rpoc, tabb, b3988, jw3951. Organism_taxid: 1110693.
Chains: A, B, C, D, E, F, G, H, I, J (323 residues) CATH domains: 3.30.1360.10 2.170.120.12
4iqz
The crystal structure of a large insert in RNA polymerase (r subunit from e. Coli
Source: Escherichia coli. Organism_taxid: 83333. Strain: k12 mg1655. Gene: b3988, jw3951, rpoc, rpoc subunit beta', tabb. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C, D, E (178 residues) CATH domains: 2.40.50.100 2.40.50.100
4jk1
X-ray crystal structure of escherichia coli sigma70 holoenzy complex with guanosine tetraphosphate (ppgpp)
Source: Escherichia coli. Organism_taxid: 83333. Strain: k12. Gene: rpoa, pez, phs, sez, b3295, jw3257. Expressed in: escherichia coli. Expression_system_taxid: 469008. Gene: rpob, gron, nitb, rif, ron, stl, stv, tabd, b3987, jw gene: rpoc, tabb, b3988, jw3951. Organism_taxid: 1110693.
Chains: A, B, C, D, E, F, G, H, I, J (323 residues) CATH domains: 3.30.1360.10 2.170.120.12
Bound ligand:   Het Group G4P is 41.46% similar to enzyme reactant NTP
4jk2
X-ray crystal structure of escherichia coli sigma70 holoenzy complex with guanosine pentaphosphate (pppgpp)
Source: Escherichia coli. Organism_taxid: 83333. Strain: k12. Gene: rpoa, pez, phs, sez, b3295, jw3257. Expressed in: escherichia coli. Expression_system_taxid: 469008. Gene: rpob, gron, nitb, rif, ron, stl, stv, tabd, b3987, jw gene: rpoc, tabb, b3988, jw3951. Organism_taxid: 1110693.
Chains: A, B, C, D, E, F, G, H, I, J (323 residues)
Bound ligand:   Het Group 0O2 is 51.22% similar to enzyme reactant NTP
4jkr
Crystal structure of e. Coli RNA polymerase in complex with
Source: Escherichia coli. Organism_taxid: 1133853. Strain: k12 / dh10b. Gene: ecdh10b_3470, o3o_23125, rpoa. Expressed in: escherichia coli. Expression_system_taxid: 562. Organism_taxid: 536056. Strain: 2011c-3493. Gene: ecdh1me8569_3846, ecdh1_4008, o3k_23925, rpob.
Chains: A, B, C, D, E, G, H, I, J, K (227 residues)
Bound ligand:   Het Group G4P is 41.46% similar to enzyme reactant NTP
4jxt
Cid of human rprd1a in complex with a phosphorylated peptide rpb1-ctd
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: rprd1a, p15rs. Synthetic: yes. Other_details: synthetic peptide
Chain: B (11 residues)
4kbj
Structure of mtb rnap beta subunit b1 and b2 domains
Source: Mycobacterium tuberculosis. Organism_taxid: 1773. Strain: h37rv. Gene: mt0695, mtci376.08c, rpob, rv0667. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B (384 residues) CATH domains: Unassigned Unassigned
4kbm
Structure of the mtb card/rnap beta subunit b1-b2 domains co
Source: Mycobacterium tuberculosis. Organism_taxid: 1773. Strain: h37rv. Gene: mt0695, mtci376.08c, rpob, rv0667. Expressed in: escherichia coli. Expression_system_taxid: 562. Gene: card, mt3689, rv3583c.
Chain: A (386 residues) CATH domains: Unassigned Unassigned
4kmu
X-ray crystal structure of the escherichia coli RNA polymera complex with rifampin
Source: Escherichia coli. Organism_taxid: 562. Gene: rpoa. Expressed in: escherichia coli. Expression_system_taxid: 562. Gene: rpob. Gene: rpoc. Gene: rpoz. Gene: rpod.
Chains: A, B, C, D, E, F, G, H, I, J (323 residues) CATH domains: 3.30.1360.10 2.170.120.12
4kn4
X-ray crystal structure of the escherichia coli RNA polymera complex with benzoxazinorifamycin-2b
Source: Escherichia coli. Organism_taxid: 562. Gene: rpoa. Expressed in: escherichia coli. Expression_system_taxid: 562. Gene: rpob. Gene: rpoc. Gene: rpoz. Gene: rpod.
Chains: A, B, C, D, E, F, G, H, I, J (323 residues) CATH domains: 3.30.1360.10 2.170.120.12
4kn7
X-ray crystal structure of the escherichia coli RNA polymera complex with benzoxazinorifamycin-2c
Source: Escherichia coli. Organism_taxid: 562. Gene: rpoa. Expressed in: escherichia coli. Expression_system_taxid: 562. Gene: rpob. Gene: rpoc. Gene: rpoz. Gene: rpod.
Chains: A, B, C, D, E, F, G, H, I, J (323 residues) CATH domains: 3.30.1360.10 2.170.120.12
4ljz
Crystal structure analysis of the e.Coli holoenzyme
Source: Escherichia coli. Organism_taxid: 536056. Strain: k12. Gene: rpoa, ecdh1_0418, ecdh1me8569_3173. Expressed in: escherichia coli. Expression_system_taxid: 562. Gene: rpob, ecdh1_4008, ecdh1me8569_3846. Escherichia coli bw2952. Organism_taxid: 595496.
Chains: A, B, C, D, E, G, H, I, J, K (224 residues) CATH domains: 3.30.1360.10 2.170.120.12
4lk0
Crystal structure analysis of the e.Coli holoenzyme/t7 gp2 c
Source: Escherichia coli. Organism_taxid: 536056. Strain: k12. Gene: rpoa, ecdh1_0418, ecdh1me8569_3173. Expressed in: escherichia coli. Expression_system_taxid: 562. Gene: rpob, ecdh1_4008, ecdh1me8569_3846. Organism_taxid: 595496. Gene: rpoc, bwg_3647.
Chains: A, B, C, D, E, G, H, I, J, K (224 residues) CATH domains: 3.30.1360.10 2.170.120.12
4lk1
Crystal structure analysis of the e.Coli holoenzyme
Source: Escherichia coli. Organism_taxid: 536056. Strain: k12. Gene: rpoa, ecdh1_0418, ecdh1me8569_3173. Expressed in: escherichia coli. Expression_system_taxid: 562. Gene: rpob, ecdh1_4008, ecdh1me8569_3846. Organism_taxid: 595496. Gene: rpoc, bwg_3647.
Chains: A, B, C, D, E, G, H, I, J, K (224 residues) CATH domains: 3.30.1360.10 2.170.120.12
4llg
Crystal structure analysis of the e.Coli holoenzyme/gp2 comp
Source: Escherichia coli. Organism_taxid: 536056. Strain: k12. Gene: rpoa, ecdh1_0418, ecdh1me8569_3173. Expressed in: escherichia coli. Expression_system_taxid: 562. Gene: rpob, ecdh1_4008, ecdh1me8569_3846. Organism_taxid: 595496. Gene: rpoc, bwg_3647.
Chains: A, B, C, D, E, G, H, I, J, K (224 residues) CATH domains: 3.30.1360.10 2.170.120.12
4mex
Crystal structure of escherichia coli RNA polymerase in comp salinamide a
Source: Escherichia coli. Organism_taxid: 83333. Strain: k12. Gene: b3295, bn17_32291, ecs4160, jw3257, lf82_1958, pez, p sez. Expressed in: escherichia coli. Expression_system_taxid: 562. Gene: b3987, gron, jw3950, k758_06833, nitb, rif, ron, rpob stv, tabd.
Chains: A, B, C, D, E, G, H, I, J, K (298 residues)
4mey
Crystal structure of escherichia coli RNA polymerase holoenz
Source: Escherichia coli. Organism_taxid: 83333. Strain: k12. Gene: rpoa, pez, phs, sez, b3295, jw3257. Expressed in: escherichia coli. Expression_system_taxid: 562. Gene: rpob, gron, nitb, rif, ron, stl, stv, tabd, b3987, jw gene: rpoc, tabb, b3988, jw3951. Gene: rpoz, b3649, jw3624.
Chains: A, B, C, D, E, G, H, I, J, K (298 residues)
4mq9
Crystal structure of thermus thermophilus RNA polymerase hol complex with ge23077
Source: Thermus thermophilus. Organism_taxid: 300852. Strain: hb8. Gene: rpod, ttha0532. Expressed in: escherichia coli. Expression_system_taxid: 562. Actinomadura sp.. Organism_taxid: 1989
Chains: A, B, C, D, E (226 residues) CATH domains: 3.30.1360.10 2.170.120.12
4noi
2.17 angstrom crystal structure of DNA-directed RNA polymera alpha from campylobacter jejuni.
Source: Campylobacter jejuni subsp. Jejuni. Organism_taxid: 192222. Strain: nctc 11168. Gene: cj1595, rpoa. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B (227 residues) CATH domains: 3.30.1360.10 2.170.120.12
4oin
Crystal structure of thermus thermophilus transcription init complex soaked with ge23077
Source: Thermus thermophilus. Organism_taxid: 300852. Strain: hb8 / atcc 27634 / dsm 579. Gene: rpod, ttha0532. Expressed in: escherichia coli. Expression_system_taxid: 469008. Synthetic: yes. Actinomadura sp.. Organism_taxid: 1989
Chains: A, B, C, D, E (231 residues) CATH domains: 3.30.1360.10 2.170.120.12
4oio
Crystal structure of thermus thermophilus pre-insertion subs complex for de novo transcription initiation
Source: Thermus thermophilus. Organism_taxid: 300852. Strain: hb8 / atcc 27634 / dsm 579. Gene: rpod, ttha0532. Expressed in: escherichia coli. Expression_system_taxid: 469008. Synthetic: yes. Synthetic: yes
Chains: A, B, C, D, E (226 residues) CATH domains: 3.30.1360.10 2.170.120.12
Bound ligand:   Het Group ATP is 65.62% similar to enzyme reactant NTP
4oip
Crystal structure of thermus thermophilus transcription init complex soaked with ge23077, atp, and cmpcpp
Source: Thermus thermophilus. Organism_taxid: 300852. Strain: hb8 / atcc 27634 / dsm 579. Gene: rpod, ttha0532. Expressed in: escherichia coli. Expression_system_taxid: 469008. Synthetic: yes. Actinomadura sp.. Organism_taxid: 1989
Chains: A, B, C, D, E (231 residues) CATH domains: 3.30.1360.10 2.170.120.12
Bound ligand:   Het Group ATP is 65.62% similar to enzyme reactant NTP
4oiq
Crystal structure of thermus thermophilus transcription init complex soaked with ge23077 and rifampicin
Source: Thermus thermophilus. Organism_taxid: 300852. Strain: hb8 / atcc 27634 / dsm 579. Gene: rpod, ttha0532. Expressed in: escherichia coli. Expression_system_taxid: 469008. Synthetic: yes. Actinomadura sp.. Organism_taxid: 1989
Chains: A, B, C, D, E (231 residues) CATH domains: 3.30.1360.10 2.170.120.12
4oir
Crystal structure of thermus thermophilus RNA polymerase tra initiation complex soaked with ge23077 and rifamycin sv
Source: Thermus thermophilus. Organism_taxid: 300852. Strain: hb8 / atcc 27634 / dsm 579. Gene: rpod, ttha0532. Expressed in: escherichia coli. Expression_system_taxid: 469008. Synthetic: yes. Actinomadura sp.. Organism_taxid: 1989
Chains: A, B, C, D, E (231 residues) CATH domains: 3.30.1360.10 2.170.120.12
4rnp
Bacteriophage t7 RNA polymerase, high salt crystal form, low temperature data, alpha-carbons only
Source: Enterobacteria phage t7. Organism_taxid: 10760. Cell_line: 293. Gene: t7 rnap. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C (780 residues)