 |
PDBsum entry 2imw
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 2imw calculated with MOLE 2.0
|
PDB id
|
|
|
|
2imw
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
6 pores,
coloured by radius |
 |
5 pores,
coloured by radius
|
5 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.71 |
1.71 |
31.7 |
-1.46 |
-0.47 |
20.9 |
85 |
 |
5 |
0 |
0 |
2 |
0 |
0 |
0 |
 |
EDO 501 P DG 1804 S DG 1805 S DT 1909 T DC 1910 T
|
 |
 |
2 |
 |
1.85 |
1.85 |
34.9 |
-1.42 |
-0.36 |
20.5 |
87 |
5 |
2 |
1 |
3 |
1 |
0 |
0 |
DDS 401 P DG 1803 S DC 1918 T
|
 |
3 |
 |
1.83 |
1.83 |
51.7 |
-0.50 |
0.01 |
19.1 |
85 |
5 |
2 |
1 |
5 |
0 |
0 |
0 |
CA 407 P EDO 504 P DG 1801 S DG 1802 S DG 1803 S DG 1805 S DA 1806 S DT 1812 S DC 1910 T DC 1911 T DT 1912 T DT 1913 T DC 1914 T DC 1917 T DC 1918 T
|
 |
4 |
 |
1.59 |
1.59 |
55.9 |
-1.66 |
-0.50 |
19.9 |
74 |
6 |
3 |
0 |
1 |
2 |
1 |
0 |
CA 407 P EDO 501 P DG 1805 S DT 1909 T DC 1910 T DC 1917 T DC 1918 T
|
 |
5 |
 |
1.79 |
1.83 |
56.2 |
-0.38 |
0.00 |
18.4 |
86 |
4 |
2 |
1 |
5 |
0 |
0 |
0 |
CA 407 P EDO 504 P DG 1801 S DG 1802 S DG 1803 S DG 1805 S DA 1806 S DA 1807 S DT 1909 T DC 1910 T DC 1911 T DT 1912 T DT 1913 T DC 1914 T DC 1917 T DC 1918 T
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |