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EBI
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Ligand clusters for UniProt code Q9WXS5
Ligand clusters for Q9WXS5: Beta-xylanase from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Top 6 (of 8) ligand clusters
Cluster 1.
2 ligand types
2 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1vbrA
Structures
PDB
Schematic diagram
1vbr
A
1vbu
A
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1vbu
(A).
2. Ligand:
XYP-XYS × 1
XYP
=Beta-D-Xylopyranose,
XYS
=Alpha-D-Xylopyranose.
PDB code:
1vbr
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
1vbu
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
ACY × 2
acetic acid
Acetic acid
PDB codes:
1vbr
(A),
1vbu
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
ACY × 1
acetic acid
Acetic acid
PDB code:
1vbr
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
ACY × 1
acetic acid
Acetic acid
PDB code:
1vbr
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
ACY × 1
acetic acid
Acetic acid
PDB code:
1vbu
(A).