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Ligand clusters for UniProt code Q9UBT2
Ligand clusters for Q9UBT2: SUMO-activating enzyme subunit 2 from Homo sapiens
Top 6 (of 10) ligand clusters
Cluster 1.
8 ligand types
12 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3kycB
Structures
PDB
Schematic diagram
3kyc
B
6cwz
D
1y8r
B
6xog
B
6xoi
B
more ...
Cluster 1 contains 8 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 2
PDB codes:
1y8q
(B),
1y8r
(B).
2. Ligand:
SO4 × 3
Sulfate ion
PDB codes:
6xog
(B),
6xoh
(B),
6xoi
(B).
3. Ligand:
ATP × 2
Adenosine-5'-Triphosphate
PDB codes:
1y8q
(B),
1y8r
(B).
4. Ligand:
JZU × 1
5'-Deoxy-5'-(Sulfamoylamino)adenosine
PDB code:
3kyc
(B).
5. Ligand:
VAY × 1
{(1r,2r,3s,4r)-4-[(5-{4-[(1s)-1-(6-Bromopyridin-2-Yl)- 1-Hydroxyethyl]thiophene-2-
Carbonyl}pyrimidin-4-Yl) amino]-2,3-Dihydroxycyclopentyl}methyl sulfamate
PDB code:
6xog
(B).
6. Ligand:
VB7 × 1
{(1r,2s,4r)-4-[(5-{4-[(1r)-3,4-Dihydro-1h-2-Benzopyran- 1-Yl]thiophene-2-Carbonyl}pyrimidin-4-
Yl)amino]-2- Hydroxycyclopentyl}methyl sulfamate
PDB code:
6xoh
(B).
7. Ligand:
VBA × 1
[(1r,2r,3s,4r)-4-{[5-(1-Benzyl-1h-Pyrazole-3-Carbonyl) pyrimidin-4-Yl]amino}-2,3-
Dihydroxycyclopentyl]methyl sulfamate
PDB code:
6xoi
(B).
8. Ligand:
VMX × 1
5'-{[(3-Aminopropyl)sulfonyl]amino}-5'-Deoxyadenosine
PDB code:
3kyd
(B).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
FHJ × 1
Dimethyl (1s,2s,3r,4r)-1-[(1s)-2-(4-Methylphenyl)-1- (Phenylamino)ethyl]-7-Oxabicyclo[2.2.1]hept-5-
Ene-2,3- Dicarboxylate
PDB code:
6cwy
(D).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4w5v
(B).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
6cwy
(D).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
6cwy
(D).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
6cwy
(D).